Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0110 ATGGGGATCCTTCCCAAGTGCTTTGGTGGCTCTGGTTCTACTAAACAACCACCCACAACAATAGAATACCTGTGCCATCGCTTTTCACTTGCCCAACTTCGAAAATCCACCAACAACTTCGACACAAGTCAACTAATCGGAAGAGGAGGCTTTGGTGAGGCTTACAGGGGTTGCATCTCCATCAATGGCGAACTAATACAAATTGCAGTGAAGAGGGTACGAGCAGGAAGATATAGACCGACAGTGCTCTCTCTGTTCAAGAATGAAATCCTAAGCCGACCCAAATTAGGTTTGCAGCAACATCATAAGATTACTCAAATGGGAATCCTTCCCAGGTGCTTTGGTGGCTCTGCGTCAGCTAAACAACCATCCACAACTATAGAACATCTATGCGCTCGCTTTTCGCTTGCACAACTTCAAAAATCTACCAACAACTTTCACTCAAGTCAACTACTTCGAATAGAACCCTTTGGTGAGGCATACAGAGGTTTCATCACTATCAACGGCGAAGCAAAAGAAATTGCAGTGAAGAGGGTACGAGATGGAAGATTCACACCACGTTTACTGTCCATGTTCAAGAATGAAATCATATTGATGTGCCAGCTGCAACACCCTAATCTGGTGTCTCTTATAGGATTTTGCTATGAATCTAAAAGCGAAATAATGATGGTGTATGAGTGCATGCCAAATGGATCCCTCAGACATCAACTAGTTCCAAGGGATGGTAAGTCGCCTATACTCTCATGGAAGAGAAGGTTAGAAATAAGCATAGGGGCCGCGCGTGGATTACACTACCTTCACTCAGGAACCAAGCGCACCATCTTCCACCGTGCTGTGTCAACGAACAGCATTCTTTTGGATGAGAATTGGGTTCCCAAGATCACAGGTTTTGATCTTGCCGTAAAGGGACCAAAATTTTCGTCCAAGGCCCTAGAACCCATTGAGTTCGATACTATTGTTGGTACAAGTACACTTCTGGCTCCTGAGTATGCTTGGCATGGAGAAATAACGCCAGAGTGCTGGAAATTGTACATTCATATTGTAGAGATTTGCTTAAATGAAGATGCCAGTGAAAGGCCAGCCATGGGCGAAGTGGAGGTGGAACTTGAGCGAGCGTTGGAACTTCAAGAGGAAGCAAGCGACAACCACCAAATTCATGCAATTTCTCTCCCTTAA 1176 0.4481 MGILPKCFGGSGSTKQPPTTIEYLCHRFSLAQLRKSTNNFDTSQLIGRGGFGEAYRGCISINGELIQIAVKRVRAGRYRPTVLSLFKNEILSRPKLGLQQHHKITQMGILPRCFGGSASAKQPSTTIEHLCARFSLAQLQKSTNNFHSSQLLRIEPFGEAYRGFITINGEAKEIAVKRVRDGRFTPRLLSMFKNEIILMCQLQHPNLVSLIGFCYESKSEIMMVYECMPNGSLRHQLVPRDGKSPILSWKRRLEISIGAARGLHYLHSGTKRTIFHRAVSTNSILLDENWVPKITGFDLAVKGPKFSSKALEPIEFDTIVGTSTLLAPEYAWHGEITPECWKLYIHIVEICLNEDASERPAMGEVEVELERALELQEEASDNHQIHAISLP 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0110 391 Gene3D Phosphorylase Kinase; domain 1 115 226 - -
Dere01g0110 391 ProSitePatterns Protein kinases ATP-binding region signature. 46 71 IPR017441 GO:0005524
Dere01g0110 391 Coils Coil 362 382 - -
Dere01g0110 391 SUPERFAMILY Protein kinase-like (PK-like) 26 104 IPR011009 -
Dere01g0110 391 PANTHER OS07G0166700 PROTEIN 25 90 IPR045272 GO:0004714|GO:0006468
Dere01g0110 391 Pfam Protein tyrosine and serine/threonine kinase 157 302 IPR001245 GO:0004672|GO:0006468
Dere01g0110 391 Gene3D Transferase(Phosphotransferase) domain 1 228 340 - -
Dere01g0110 391 Gene3D Phosphorylase Kinase; domain 1 13 108 - -
Dere01g0110 391 ProSiteProfiles Protein kinase domain profile. 40 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0110 391 SUPERFAMILY Protein kinase-like (PK-like) 137 373 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0110 Dere-ChrDere01 4527006 4530381 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0110 24 72 Receptor kinase-like Gene Family AT3G51550 46.939 2.34e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Dere01g0110 PK_Tyr_Ser-Thr 2.9e-22 CL0016