Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0109 ATGGGGATCCTTGCCAAGTGCTTTGGTGGCTCTGGTTCTACTAAACAACCACCCACAACAATAGAATATCTGTGCCATCGCTTTTCACTTGCCCAACTTCGAAAATCTACCAACAACTTCGACACAAGTCAACTAATCGGAAGGGGACCCTTTGGTGAGGCTTACAGGGGTTGCATCTCCATCAATGGCGAACCAATACAAATTGCAGTGAAGAGGGTAAGAGCAGGAAGCTATACAACGCCAGTGCTCTCTCTGTTCAAGAATGAAATCCTATTCATGTGCCAGCTACACCATCCTAATTTGGTGTCTCTTGTTGGATTTTGCAACGATGAAAAAGCAAAAGAATTTATGGTGGTTTATGAGTACATGCCAAATGGATCTCTGGCTGATCAATTAGATGGACGGGATAATAGGTCACCAATACTGTCATGGAAAAAAAGGCTAGAAGTCAGCATAGGAGCAGCGCGTGCATTACACTACCTTCATGCCGGAACCAAGCGCACCATCTTCCACCGTGATGTGAAACCGTATAACATTCTTTTGGATGAGAATTGTACTCCCAAACTCACAGGTTTTGGGTTTGCTTTAAAGGGCCCAAAATTTTCATCCAAGGCCCCAAAACCCATCGAGTTGGATCACATTGCAGCATTGATATGCGGAAAGTCGATACATGAAATTTATTGTATGATTTCGGAGGAGGAGGGAGAGGATGAACACACTTGGTTATCTTTCGATAACAAAATTAAAGAACTACAAAATGCGAAGGCTATGAGAATTATTGATCCAAGTTTGGTAGGACAAATACTGCCAGAGTGTTGGAAATTGTATATGGACATTACACAGAGTTGCTTGAGTGAAGATGAGAATCCGAGGCCAGCGATGGGCGAAGTGGAGGTGGAACTTGAGCGTGTCTTGGAAATTCAGGAGGAAGCTGATGCCAACATCCCATTTCATGCTTTCTTATGGTCTTAA 972 0.4342 MGILAKCFGGSGSTKQPPTTIEYLCHRFSLAQLRKSTNNFDTSQLIGRGPFGEAYRGCISINGEPIQIAVKRVRAGSYTTPVLSLFKNEILFMCQLHHPNLVSLVGFCNDEKAKEFMVVYEYMPNGSLADQLDGRDNRSPILSWKKRLEVSIGAARALHYLHAGTKRTIFHRDVKPYNILLDENCTPKLTGFGFALKGPKFSSKAPKPIELDHIAALICGKSIHEIYCMISEEEGEDEHTWLSFDNKIKELQNAKAMRIIDPSLVGQILPECWKLYMDITQSCLSEDENPRPAMGEVEVELERVLEIQEEADANIPFHAFLWS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0109 323 SUPERFAMILY Protein kinase-like (PK-like) 15 300 IPR011009 -
Dere01g0109 323 ProSiteProfiles Protein kinase domain profile. 40 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0109 323 PANTHER OS07G0166700 PROTEIN 25 308 IPR045272 GO:0004714|GO:0006468
Dere01g0109 323 Gene3D Phosphorylase Kinase; domain 1 13 122 - -
Dere01g0109 323 Gene3D Transferase(Phosphotransferase) domain 1 214 317 - -
Dere01g0109 323 PIRSF ILK 267 317 - -
Dere01g0109 323 PIRSF ILK 11 211 - -
Dere01g0109 323 Pfam Protein tyrosine and serine/threonine kinase 43 197 IPR001245 GO:0004672|GO:0006468
Dere01g0109 323 Gene3D Transferase(Phosphotransferase) domain 1 123 208 - -
Dere01g0109 323 SMART serkin_6 40 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0109 323 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0109 Dere-ChrDere01 4523586 4524647 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0109 5 309 Receptor kinase-like Gene Family AT1G30570 35.347 9.26e-51 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Dere01g0109 PK_Tyr_Ser-Thr 3.3e-26 CL0016