Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0108 ATGAAAGGGTTGAATGAAAGAGGAGTGTCTGTATTGTTCAGGAGTGAATTTCAGATGGACATTGAGTCTCTTGGCCCTAGCCAATTCGTTTCAGACATAGATCAAACAAAATTTGAAGCTCTTTCTTATTGCAGTTTGCAGCAAAAGCACAATATTACTCAAATGGGAATCCTTACCAAGTGCTTTGGTGGCTCCGGTTCAACTAAACAACCATCCACAACAATAGAATACTTGTGCCATCGCTTTCCTCTTGCCCAACTTGAAAAATCTATACACAACTTTGACGAAAGCCGAAAAATCGGAGAAGAAGGTTTCGGTGAGGTGTACAAAGGTTGCATCTCCATCAATGGTGAAGTAAAAGATATTGCAGTGAAGCGGGTAGGAGAAGGAAGATCTGATTGGCTCTCTGAGATCAAGAATGAAATCCTGTTCATGTGCCAGCTACACCACCCTAATCTGGTGTCTCTTATTGGATTTTGCTATGATAAAAATGAAATGATGGCGGTATATGAGTACATGCCAAATGGATCCCTCAAATATCAACTTGACCAAAGTGATAGCAAGTCAGCAATACTATCATGGAAGAAAAGGCTAGAAATCAGCGTAGGAGCAGCGCGTGGATTACATTACCTTCATGCAGGAACCAAGCGTACCATTTTTCACCGTAATGTGAAATCGAGTAATATTCTTTTGGATGAGAACTGGACTCCCAAACTCACAGGTTTCAGGTTTGCTGTGAAGGGCCCAAAATTTTCGTCCAAGGCCCCAAAGCACATCGAGTTCGATTGTATTACAGGTACTATTGGATACATAGCCCCTGAATATTGTAAGCATCTTACTGTCACAGATAAATGTGACGTCTATTCTTTTGGAGTAGTTTTGTTAGAATTGATATGTGGAAGGTCCATTGTCCAACTTGAAAATGTGCTTTGGGACAGTAAGGATGGACATGCCTTATCATCTTTCAATTATAACAAGGTAGCACAGAATCTTGCAGAAAAGGGAAATGTTGAGAGAATTATTGACCAAAATTTGGTGGGACAAATAACGCCAGAGTGCTGGAAATTGTATATGGACATTGTAGAGAGTTGTTTAAGTGAAGATCCAGAAGAGAGGCCGGCAATGGGCGAAGTGGAGGTAGAACTTGAGCGTGTATTGGAATTACAAGAGGAAGCAAATGCCAAACACCCATTTCATGCTTTCTTGCTCTCTTAA 1215 0.4082 MKGLNERGVSVLFRSEFQMDIESLGPSQFVSDIDQTKFEALSYCSLQQKHNITQMGILTKCFGGSGSTKQPSTTIEYLCHRFPLAQLEKSIHNFDESRKIGEEGFGEVYKGCISINGEVKDIAVKRVGEGRSDWLSEIKNEILFMCQLHHPNLVSLIGFCYDKNEMMAVYEYMPNGSLKYQLDQSDSKSAILSWKKRLEISVGAARGLHYLHAGTKRTIFHRNVKSSNILLDENWTPKLTGFRFAVKGPKFSSKAPKHIEFDCITGTIGYIAPEYCKHLTVTDKCDVYSFGVVLLELICGRSIVQLENVLWDSKDGHALSSFNYNKVAQNLAEKGNVERIIDQNLVGQITPECWKLYMDIVESCLSEDPEERPAMGEVEVELERVLELQEEANAKHPFHAFLLS 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0108 404 Coils Coil 375 395 - -
Dere01g0108 404 Gene3D Transferase(Phosphotransferase) domain 1 173 400 - -
Dere01g0108 404 ProSiteProfiles Protein kinase domain profile. 94 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0108 404 PANTHER OS07G0166700 PROTEIN 79 389 IPR045272 GO:0004714|GO:0006468
Dere01g0108 404 Pfam Protein tyrosine and serine/threonine kinase 97 380 IPR001245 GO:0004672|GO:0006468
Dere01g0108 404 SUPERFAMILY Protein kinase-like (PK-like) 69 381 IPR011009 -
Dere01g0108 404 Gene3D Phosphorylase Kinase; domain 1 79 172 - -
Dere01g0108 404 FunFam receptor-like protein kinase FERONIA 60 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0108 Dere-ChrDere01 4518756 4520769 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0108 80 389 Receptor kinase-like Gene Family AT2G39360 43.871 1.44e-74 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Dere01g0108 PK_Tyr_Ser-Thr 9e-40 CL0016