Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0105 ATGATTGGGGTGTATGAGTACTTGCCCAATGGATCCCTCATAGATCAACTATATCGAAAGGATAGTAACTCACCAGCACTGTCATGGAAGAAACGGCTAGAAATCATCATAGGAGTAGCACGTGGATTGCACTACCTTCAAACAGGAACCAAGCGCACTATCATTCACCGAGATGTAAAATCGAGTAACATTCTTCTTGATGAGAATTGGATTCCCAAACTCTCAAATTTCGGGAAAGTTTTGAAGGGCCCAAAATTTTCGTCTGAGGCCCCAAAACCCATTGAGACGGCTATTACAGTTACCTTCGGATACATTGCCCCTGAGTACATGCTATATGGTGAGGTCATGGATAAATGTGATGTGTATTCTTTTGGAGTGGTATTGTTAGAATTGATATGCGGAAAGCCTAGAGCCCAAATCGGAACTCTGATTTTAGATAGTGAATTTGAGGAAAGAATTGGCCAAAAAGAAATATACGAGGAAGACAGTGAACATGGTTCACCATCGACTTGGGATAAGGAGGGAGAGGATGAGGGTGAGGTGAAGGATGAGGACGCGAGTGCATATGCTTCGCCATCGATACAGGATAAGAACAGAGAGAGTGAGGATTATCATATTTTGTCATCTTTATTGAATAGAGCTAAGGTAGTACCGAATGGGGCAGAAAAGGTAAATGCTAAAAGAATTATTGATCCAATTTTGATGGGAGAAATAGCACTAGACTGCTGGAAATTGTATATGCACATTGTAGAGAGTTGCTTATATGAAGATCCCAACCCTGAATTCCATGCTTTCTTAATCTTGTAA 807 0.4102 MIGVYEYLPNGSLIDQLYRKDSNSPALSWKKRLEIIIGVARGLHYLQTGTKRTIIHRDVKSSNILLDENWIPKLSNFGKVLKGPKFSSEAPKPIETAITVTFGYIAPEYMLYGEVMDKCDVYSFGVVLLELICGKPRAQIGTLILDSEFEERIGQKEIYEEDSEHGSPSTWDKEGEDEGEVKDEDASAYASPSIQDKNRESEDYHILSSLLNRAKVVPNGAEKVNAKRIIDPILMGEIALDCWKLYMHIVESCLYEDPNPEFHAFLIL 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0105 268 ProSiteProfiles Protein kinase domain profile. 1 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0105 268 MobiDBLite consensus disorder prediction 157 200 - -
Dere01g0105 268 SMART serkin_6 1 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0105 268 Gene3D Transferase(Phosphotransferase) domain 1 8 264 - -
Dere01g0105 268 Pfam Protein tyrosine and serine/threonine kinase 4 135 IPR001245 GO:0004672|GO:0006468
Dere01g0105 268 ProSitePatterns Serine/Threonine protein kinases active-site signature. 54 66 IPR008271 GO:0004672|GO:0006468
Dere01g0105 268 SUPERFAMILY Protein kinase-like (PK-like) 4 141 IPR011009 -
Dere01g0105 268 MobiDBLite consensus disorder prediction 157 176 - -
Dere01g0105 268 FunFam Os07g0541700 protein 8 92 - -
Dere01g0105 268 PANTHER OS07G0166700 PROTEIN 1 257 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0105 Dere-ChrDere01 4481312 4482118 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0105 1 136 Receptor kinase-like Gene Family AT5G39000 55.474 5.20e-44 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Dere01g0105 PK_Tyr_Ser-Thr 1.6e-21 CL0016