Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0101 ATGAAAGCGAATTGTAGTGCTGTGTACAAGAAACACCACCCTCCGTCATTGAATGATGATATGTGGCGGTCGGAGTGGATAGCCAAAGATTGTAAAATCCACAAGCGACTATCTCTCCATGGAATAAACACTGTCAAGGATCTTTTGCAGTTATATATCATTAACCCATCTTCGTTGGTGGAGAAAGTTGGCAACATTCCAAAGAAGTCATGGGAGGCAATTATTGAAGATGCTAAGGCTTATGAACACTTTGATCTGTGTTGCCTTCATATTCTATTGGCAACATTTGGTGAAAATGGTCAAATTGAAACATGGTCAGATTCTGGTCAATCATTCACTTCAACTTCATATGTTGATGAAGGAATGCATAATGACCAAATATATGCTAATCCGTTGCCAGACTTAACAGCAATAAACTTTCAAAATAAACAATGTGCAAAGATCAATGCAAGAGATGTGCTTCAAAGCCTTCAGAAAATGGTAGCCAACGCCATTGCTTCTCCTAAGTCTTCAGTTTTACAGAACCCCATCTACTTCGGTGAATCAGGTTCAAATTTTTTTGGTGGTTCTCTGAAGGGTCTTTGTTTACATCCTAAACCAACAAAACAACGAAGAAATTTCACCACTTTGGTTGTGGCTTCAGCCAGTACCCCCGTCACAACCCGCAATAGCAGCAGCCGTAGTGGCAGATTTTACTTCAATTTCACTGGGTTTCCTTTCCCTTTGGGTCCTTTCCTCAATAGGCGCACAATTAGGAAAGAGGCTGTGAAAGGCTGTATATGGCTATTCGAACAAGAGCAAGCCTTGGGCTTCAGCAGTGTATCAACAAACATTAGAATGACAGTAATCAAACTCAAATCTGGGGGCTTATGGGTGCATGCACCTATAGCTCCAACTGATGAATGTATTCAGCTTGTTAAAGAATTAGGAGCTCCAGTGGAATATATTGTTCTTCCTACTTTTGCTTATGAGCATAAAATATTTGTTGGTCCATTTTCTAGAAAGTTTCCTCGTGCTCAAGTGTGGGTAGCACCAAGGCAATGGAGTTGGCCATTGAACTTACCACTGGAATTTTTTGGGATTTTTCGGTCTAGAACATTGCAAGACAAGGATTTATCTACACCCTGGGCTGATGAAATAGAGCAAAAAGTTCTAAGCTCCCCAGAAGTTGGAATTGGACCGTATGTGGAGGTAGCTTTCTACCATAAGCCTTCAAGAACACTGTTGGTGACGGATGCTGTTATTTTTGTCCCCAGACAGCCGCCACAGTGTATCAGCAAAGAATCCTTGTTAGCATCTGCAAAAAATGGATTGGCTGTAAAAATTCTTAGTAAAGGAAAGGAAGTCCCTGATGAACCAGTTGTTGACAACAAAAGGAACCGCCAAAAAGGATGGGAAAGAATGGTTCTACAAATCTTGTTTCTTGGTCCATCAAATCTCTTAGAACCAAATGCTACCTTTGAACAGATGTCACAGAAGTTGATTGTTTCACCTATTGTGAAGACTCTGGTCTTCAGTAAAGTTCCTGAAAAGGTGAGAGACTGGGTATATAGTATTTCTCAGGATTGGAAGTTCAAGAGAATAATCCCTGCTCATTTTGCTGCTCCAATAAATGCAAGTAGGTCTGATTTCCGGGCAGCATTTGCATTTCTGGATGAGCTTCTGGGCGAGCCATATGTTACTTGGTTTTCAGTCTCTCTCGTATTCTCATCGATCATGGGAAAGGCAGCAAGCTATTTTCCTCCAGATGACATGAGGACCTTGTCATCCCTAGACCAGTTTCTAGTCTCAGTTGGAGCTGTAAAGAAAACTGTCTCAGGCAGGAAGCAATGA 1833 0.4135 MKANCSAVYKKHHPPSLNDDMWRSEWIAKDCKIHKRLSLHGINTVKDLLQLYIINPSSLVEKVGNIPKKSWEAIIEDAKAYEHFDLCCLHILLATFGENGQIETWSDSGQSFTSTSYVDEGMHNDQIYANPLPDLTAINFQNKQCAKINARDVLQSLQKMVANAIASPKSSVLQNPIYFGESGSNFFGGSLKGLCLHPKPTKQRRNFTTLVVASASTPVTTRNSSSRSGRFYFNFTGFPFPLGPFLNRRTIRKEAVKGCIWLFEQEQALGFSSVSTNIRMTVIKLKSGGLWVHAPIAPTDECIQLVKELGAPVEYIVLPTFAYEHKIFVGPFSRKFPRAQVWVAPRQWSWPLNLPLEFFGIFRSRTLQDKDLSTPWADEIEQKVLSSPEVGIGPYVEVAFYHKPSRTLLVTDAVIFVPRQPPQCISKESLLASAKNGLAVKILSKGKEVPDEPVVDNKRNRQKGWERMVLQILFLGPSNLLEPNATFEQMSQKLIVSPIVKTLVFSKVPEKVRDWVYSISQDWKFKRIIPAHFAAPINASRSDFRAAFAFLDELLGEPYVTWFSVSLVFSSIMGKAASYFPPDDMRTLSSLDQFLVSVGAVKKTVSGRKQ 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0101 610 Pfam Domain of unknown function (DUF4336) 485 550 IPR025638 -
Dere01g0101 610 Pfam Domain of unknown function (DUF4336) 257 480 IPR025638 -
Dere01g0101 610 Pfam Calmodulin binding protein central domain 16 79 IPR046830 -
Dere01g0101 610 PANTHER YALI0C07656P 169 556 IPR025638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0101 Dere-ChrDere01 4448578 4456945 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0101 1 80 Calmodulin-binding Proteins AT5G62570 43.210 1.22e-14 74.3