Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0099 ATGGCCAGGCAAAACCGCGAAAGGGTGGTCCCTCTCGCTGCGGTACACAGGTGGATTGATCGACAGGTGCTGGGGAAGAATTCTCAAAGTAGCAGCGGCCGAGAGAGCGGCGGCGACGCCGTGGAGAACAACTCCTTCGAGTGCTACGCGTGCACTCAGGTCGGCGTCCCTGTCTTTCACTCCACCAGCTGCGACGGCTATCACCAGCTCCAATGGGAGGCTTCTGCCGGCTCTTCCTTGATCCCCATCCAGAACCGAACCGCCCGCAACAACCCGACCAGACCGAAATCGGGTCCGTTCGGGCGAGTTCTGGACCCGCGCAGCAAGCGCGTGCAGAGGTGGAACAGAGCGTTGCTGTTGGCGCGTGGGATGGCGCTGGCCATCGACCCGCTGTTCTTCTACGCGTTGTCGATCGGAAGGGAAGGGACACCGTGCCTGTACATGGACGGAGAGCTGGCCGCCATCGTCACGGTGCTTCGCACGTGCGTGGATGCGGTGCATGTGTTCCACATGTGGCTACAGTTGAGGTTGGCTTACGTGTCGAAGGAGTCGCTGGTGGTCGGGTGCGGGAAGCTCGTGTGGGATGCACGTGCCATAGCGTCGCATTACCTTGGTTCTCTGAAACGGTTCTGGTTCGACGCCTTCGTCATCCTCCCTATTCCGCAGGCTGTGTTTTGGTTAATACTACCTAAATTAATAAGAGAAGAGCGTATTAAAATCATAATGACAATACTACTACTAGTCTTCCTGTTCCAGTTTCTCCCCAAGGTCTACCACAGCATCATCTTGATGAGAAGAATGCAAAAAGTCACAGGCTACATCTTTGGCACCATTTGGTGGGGCTTTGGCCTCAATCTTATAGCTTACTTCATTGCTTCTCATGTTGCTGGAGGGTGCTGGTATGTCCTTGCAATTCAACGCGTTGCATCATGTCTCCAGCAGCAGTGTGAAAGAAGTCCTGGTTGTAATCTCTCTCTTTCATGCACAGAGGAGGTATGTTACCAGTATATGTTACCAAAAAGCTCACCAGGAAATCCAAGTGGTGGAAACTCCACTGTAGTGGGGAGAAAGCTCTTGTGCTTAGATGTTGAAGGACCTTTCAGATATGGGATCTACCAGTGGGCTCTTCCAGTCATATCCAGCAATTCCTTGGCTGTCAAGATCCTATATCCCATATTTTGGGGTTTGATGACGCTCAGCACCTTTGGCAATGATCTTGAACCCACAAGTCACTGGCTAGAAGTAATTTTCAGCATATGCACTGTACTTAGTGGATTACTGCTTTTCACTTTGTTGATTGGGAACATCCAGGTATTCCTACATGCAGTAATGGCGAAGAAGAGAAAGATGCAGCTGAGATGCCGTGACATGGAGTGGTGGATGAGGAGGAGGCAGCTACCGTCCCAGTTAAGACAAAGAGTTCGCCATTTTGAGCGTCACAGATGGGCAGCCATGGGAGGAGAAGATGAACTGGAAATGATAAAAGACTTGCCAGAAGGTCTGAGGAGGGACATCAAGCGCTATCTATGCCTAGACCTCATAAAAAAGGTACCTCTGTTTCACAACTTGGATGATCTTATTCTTGATAACATCTGTGACAGGGTTAAACCGCTAGTCTTTTCTAAAGATGAAAAGATCATTAGAGAAGGTGACCCTGTGGCAAGGATGGTTTTCATTGTTCGTGGACGAATTAAACGAAGCCAAAGCCTAAGCAAGGGCATGGTAGCCACCAGCATCCTTGAAGCAGGAGGGTTTCTGGGTGATGAGCTGCTCTCGTGGTGCCTTCGCCGGCCGTTCATAGACCGGCTTCTGGCATCCTCAGCCACATTTGTATGTGTTGAATCAACAGAAGCCTTTGGCCTGGATGCTGAACACCTCAAGTACGTCACTGATCACTTCCGGTACAGATTTGCCAATGAAAGACTCAAGAGAACAGCCAGGTATTACTCATCCAATTGGCGAACCTGGGCTGCTGTTAACATACAATTTGCCTGGCAACGTTACAGGAAAAGGACTAGAGGTCCAGTGATTCCTGTAATGGAAAATGGAGGCACTGAACGAAGGCTCTTGCAGTATGCTGCAATGTTCATGTCAATAAGGCCACATGACCATCTTGAATAA 2121 0.5021 MARQNRERVVPLAAVHRWIDRQVLGKNSQSSSGRESGGDAVENNSFECYACTQVGVPVFHSTSCDGYHQLQWEASAGSSLIPIQNRTARNNPTRPKSGPFGRVLDPRSKRVQRWNRALLLARGMALAIDPLFFYALSIGREGTPCLYMDGELAAIVTVLRTCVDAVHVFHMWLQLRLAYVSKESLVVGCGKLVWDARAIASHYLGSLKRFWFDAFVILPIPQAVFWLILPKLIREERIKIIMTILLLVFLFQFLPKVYHSIILMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLQQQCERSPGCNLSLSCTEEVCYQYMLPKSSPGNPSGGNSTVVGRKLLCLDVEGPFRYGIYQWALPVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSHWLEVIFSICTVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSQLRQRVRHFERHRWAAMGGEDELEMIKDLPEGLRRDIKRYLCLDLIKKVPLFHNLDDLILDNICDRVKPLVFSKDEKIIREGDPVARMVFIVRGRIKRSQSLSKGMVATSILEAGGFLGDELLSWCLRRPFIDRLLASSATFVCVESTEAFGLDAEHLKYVTDHFRYRFANERLKRTARYYSSNWRTWAAVNIQFAWQRYRKRTRGPVIPVMENGGTERRLLQYAAMFMSIRPHDHLE 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0099 706 Gene3D Jelly Rolls 517 635 IPR014710 -
Dere01g0099 706 CDD CAP_ED 519 626 IPR000595 -
Dere01g0099 706 Pfam Ion transport protein 114 437 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dere01g0099 706 SUPERFAMILY Voltage-gated potassium channels 105 440 - -
Dere01g0099 706 Gene3D - 140 442 - -
Dere01g0099 706 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 94 672 - -
Dere01g0099 706 SMART cnmp_10 519 645 IPR000595 -
Dere01g0099 706 SUPERFAMILY cAMP-binding domain-like 446 633 IPR018490 -
Dere01g0099 706 ProSiteProfiles cAMP/cGMP binding motif profile. 519 598 IPR000595 -
Dere01g0099 706 Gene3D Helix hairpin bin 445 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0099 Dere-ChrDere01 4384954 4390747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0099 44 706 Ion Channels AT5G15410 78.730 0.0 1033