Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0098 ATGGGGTTGAAACTTACGAAGGAGGGGCCACCCAAAGTTGAAGACCTGAGTTTACATCACCACTTGATCAATTACCTTACCAAAAAATTATATATTCGTAACATAGTTTCTAAGCAACGGAGGAGAATGCTCATTGCTGGCTATGATCTTGACATGTCATATATCACAGATCGATTACTTGCAATGTCATTTCCTGCTGAACGAATGCGAGCCATGTATAGAAATCCTCTCTGGCAGGTCAAATCTGTGCTGGACATGAGACATCATGGGCATTATAAGATATATAATCTCTGTATAGAAGAAAAATATGATCCAGCACGCTTCTATGGTCGTGTGGAAACATATCCTTTTGATGACAACCATGTACCGCCTCTTGAAATGATCAAGAACTTCTGTGAAAGCGTACATTCATGGCTATCAAGCGACCCAAAAAATATTGCTGTCATTCATTGCATGGCTGGGAAGGGTAGAACTGGCTTAATGGTGTCTGCATACCTAGTTTATTGCGGCATGTCAGCAGATGAGGCACTTCAGCTGTATGCAGATAGACGGACAACCAATAATCAAGGAGTATCAATACCAAGCCAACGTCGTTATGTAAGGTATTGGGAAAGTATGCTTTCTGTTCCTAGAGGCATCGGTTATGAACCGGCAAATGTGAGCTTGCCTCAACCATGTAGCAGAGAATTGCGGCGAATCCGGCTTTATGATACAGTTAACATTGAGGCTATCTTCTTTGTGATCTTAGAGATGCAGGAGGTTCCTAATCAGGTCTACCGTCCATCGGTAGAGATTATCAGGAGTAGCTGCAGACAAGTTAAGAAAGGATATCAGCGAAACTACAGTCCTCGCTATTATCTTTCTTATATTGAAGGTGATGAAGATGGAAATGAGTCAGAATTAGAAGAACCTCGTGTTGTAGTCCAGATGGACACTGAGGATCCTGCAATCTACCAAAAATCTTGTCTGGACCATTATTTTGACAAGCCTATCAAACTTACTGGAGATGTTCGTCTCATATTCTACCAAAAAATGATGGGAGGGCGTCTTTTCTACTGCTGTTTTAATACAGCTTTTATTAGGAATGGCTTGCTACAGCTCAAAATACAGGACTTGGACAAGGTAGGGAGTAAAGGAAGATCATTGTGTGGCCCATCCTTCTGTTTAGAACTTCTGTTTGGTCCTGCCAATACAAGACATTCGCCACCAACTGATGGTGAGAATTCCGGATTCTCTAGCTCTTCATCTTGCTTATCTATAACATTAGAAATCACCTCAATCATTCTCCTCTCATCCCGAAAAGCCATCATTGGCTCTTCTTTATGCTTAAAGCCTTTGGAATCACCTCAGAAAGACCTTGGGATATCTATAAATTGCTAA 1380 0.4138 MGLKLTKEGPPKVEDLSLHHHLINYLTKKLYIRNIVSKQRRRMLIAGYDLDMSYITDRLLAMSFPAERMRAMYRNPLWQVKSVLDMRHHGHYKIYNLCIEEKYDPARFYGRVETYPFDDNHVPPLEMIKNFCESVHSWLSSDPKNIAVIHCMAGKGRTGLMVSAYLVYCGMSADEALQLYADRRTTNNQGVSIPSQRRYVRYWESMLSVPRGIGYEPANVSLPQPCSRELRRIRLYDTVNIEAIFFVILEMQEVPNQVYRPSVEIIRSSCRQVKKGYQRNYSPRYYLSYIEGDEDGNESELEEPRVVVQMDTEDPAIYQKSCLDHYFDKPIKLTGDVRLIFYQKMMGGRLFYCCFNTAFIRNGLLQLKIQDLDKVGSKGRSLCGPSFCLELLFGPANTRHSPPTDGENSGFSSSSSCLSITLEITSIILLSSRKAIIGSSLCLKPLESPQKDLGISINC 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0098 459 Gene3D - 295 398 - -
Dere01g0098 459 ProSiteProfiles Phosphatase tensin-type domain profile. 41 210 IPR029023 -
Dere01g0098 459 CDD PTP_PTEN 51 204 IPR045101 GO:0016791
Dere01g0098 459 Pfam Tyrosine phosphatase family 143 185 IPR026893 GO:0004721
Dere01g0098 459 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 303 395 IPR035892 -
Dere01g0098 459 ProSitePatterns Tyrosine specific protein phosphatases active site. 149 159 IPR016130 GO:0016311|GO:0016791
Dere01g0098 459 Gene3D Protein tyrosine phosphatase superfamily 27 209 IPR029021 -
Dere01g0098 459 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 30 402 - -
Dere01g0098 459 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 129 184 IPR000387 GO:0016311|GO:0016791
Dere01g0098 459 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 207 IPR029021 -
Dere01g0098 459 SMART PTEN_C2_2 223 395 IPR014020 -
Dere01g0098 459 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN 28 210 - -
Dere01g0098 459 Pfam C2 domain of PTEN tumour-suppressor protein 313 393 IPR014020 -
Dere01g0098 459 ProSiteProfiles C2 tensin-type domain profile. 241 396 IPR014020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0098 Dere-ChrDere01 4376766 4382178 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0098 1 399 Protein tyrosine phosphatase (PTP) family AT5G39400 67.574 0.0 567