Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere01g0090 | ATGGCAACCAATAACGGCCAGTCCCTCACGGCGGCGGTGCCGCCCTCTCGTCCGACGATCACTCTTCCGCCGCGACCTTCCATGGAGGCCTTCTTCGCCGGTGGACCCGGTTTAAGCCCGGGCCCCTTGACTCTCGTGTCCAGCTTCTTCTCCGACAGCCACCCTGACTCCGATTGTCGTTCTTTCTCTCAGTTGCTCGCCGGAGCTATGGCTTCTCCGTTGGCTCTCGGCGCGAGGCCTAGCTTCTTTTCGGACAATTCCACGGACAATTACTCCAAAGAAGCGGCTTCCGAGGATGGAGCGAAGAAGAATTTAGGGTTCAAGCAGAGTAGACCCATGAATTTGGTGATTGCTCGTTCACCATTGTTTACAATCCCAACCGGGCTAAGCCCTTCTGGGTTGCTTAATTCTCCGGGCTTCTTTTCGCCGCAGAGTCCCTTTGGGATGTCCCACCAACAGGCTTTAGCACAGGTTACAGCTCAAGCTGTCCTAGCACAATCACATATGCATATGCAAGCTGATTTTCACCCATCTGCTGTAACAGTTCCTGCTGAACCATTGGCAGCACCGCCATCCAGTGCTCCAGCTGAAGCTTCAGAACTGCAAGTGGCACCATCTGTATCAGACCCTAAAAGTACTCAACAAGAGATATCAGAGATTTCTCTTGCTGATAAGAAATATCAACCTCCTTCCCAGGGTGTTGACAAACCTACAGATGATGGCTATAACTGGCGTAAGTATGGGCAGAAGCAGGTTAAGGGGAGTGAGTATCCACGAAGCTACTACAAGTGTACACATCTGAATTGCCCTGTGAAGAAAAAGGTTGAGCGTGCCCCTGATGGCCACATAACTGAAATTATCTATAAAGGCCAGCATAACCATGAAGTGCCTCCGCCAAATAGGCGTGCTACCAAAGATAATAGTGAATCAAATGAAAACAAAAGCATTCAAGCTAAGTCAGAGTCAAATACACAGGGTTTGGTTGGAAACTCAAACAAGTTTGGTGAAGGCATGCCTGATCATTCAATGCCCGAGAGTGACCAGACCTGCAGTCAAGGGATTCCCAGACAGTTACCTGGATCAAGTGAAAGTGAGGAAGCACTTGATGCAAATATTACCGAAGAAGATGGAGATGATGGTGAGCCAAACCGAAAAAGGAGGAACACTGAGGTTGGAGCTTCTGAAGTATCTCTGTCCCACAAGACTGTTACAGAACCTAAAATCATTGTGCAAACAAGAAGTGAAGTTGATCTGCTAGATGATGGCTACCGCTGGCGCAAGTATGGGCAAAAAGTGGTAAAGGGAAATCCTTATCCAAGGAGTTATTACAAATGCACTAGTGCAGGATGTAATGTGCGTAAACATGTTGAGAGAGCTTCAACAGACCCCAAAGCTGTCATAACTACGTATGAGGGAAAACATAATCATGATGTGCCTGCTTCTAGAAATAGCAGCCAGACCACAGCTGCTACCAATTCAATACCTTTAAAACCCCAAAAAGTGATTCCTGGGAAGCATACTTTGCTTGAAGACATGGATTTTGGAAATAATGATCAAAGACCAGCTGTTTTACGCTTAAAAGAAGAGCAGAACATAGTATAA | 1602 | 0.4725 | MATNNGQSLTAAVPPSRPTITLPPRPSMEAFFAGGPGLSPGPLTLVSSFFSDSHPDSDCRSFSQLLAGAMASPLALGARPSFFSDNSTDNYSKEAASEDGAKKNLGFKQSRPMNLVIARSPLFTIPTGLSPSGLLNSPGFFSPQSPFGMSHQQALAQVTAQAVLAQSHMHMQADFHPSAVTVPAEPLAAPPSSAPAEASELQVAPSVSDPKSTQQEISEISLADKKYQPPSQGVDKPTDDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCPVKKKVERAPDGHITEIIYKGQHNHEVPPPNRRATKDNSESNENKSIQAKSESNTQGLVGNSNKFGEGMPDHSMPESDQTCSQGIPRQLPGSSESEEALDANITEEDGDDGEPNRKRRNTEVGASEVSLSHKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTSAGCNVRKHVERASTDPKAVITTYEGKHNHDVPASRNSSQTTAATNSIPLKPQKVIPGKHTLLEDMDFGNNDQRPAVLRLKEEQNIV | 533 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere01g0090 | 533 | MobiDBLite | consensus disorder prediction | 479 | 495 | - | - | |
| Dere01g0090 | 533 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
| Dere01g0090 | 533 | SMART | WRKY_cls | 238 | 296 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
| Dere01g0090 | 533 | SMART | WRKY_cls | 419 | 478 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
| Dere01g0090 | 533 | ProSiteProfiles | WRKY domain profile. | 239 | 297 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
| Dere01g0090 | 533 | MobiDBLite | consensus disorder prediction | 473 | 498 | - | - | |
| Dere01g0090 | 533 | MobiDBLite | consensus disorder prediction | 287 | 309 | - | - | |
| Dere01g0090 | 533 | FunFam | WRKY transcription factor 33 | 406 | 472 | - | - | |
| Dere01g0090 | 533 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
| Dere01g0090 | 533 | MobiDBLite | consensus disorder prediction | 183 | 250 | - | - | |
| Dere01g0090 | 533 | MobiDBLite | consensus disorder prediction | 205 | 221 | - | - | |
| Dere01g0090 | 533 | SUPERFAMILY | WRKY DNA-binding domain | 237 | 297 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
| Dere01g0090 | 533 | MobiDBLite | consensus disorder prediction | 377 | 391 | - | - | |
| Dere01g0090 | 533 | FunFam | WRKY transcription factor | 225 | 298 | - | - | |
| Dere01g0090 | 533 | MobiDBLite | consensus disorder prediction | 344 | 367 | - | - | |
| Dere01g0090 | 533 | SUPERFAMILY | WRKY DNA-binding domain | 411 | 479 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
| Dere01g0090 | 533 | Gene3D | WRKY domain | 228 | 298 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
| Dere01g0090 | 533 | Gene3D | WRKY domain | 404 | 480 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
| Dere01g0090 | 533 | MobiDBLite | consensus disorder prediction | 287 | 399 | - | - | |
| Dere01g0090 | 533 | ProSiteProfiles | WRKY domain profile. | 414 | 479 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
| Dere01g0090 | 533 | Pfam | WRKY DNA -binding domain | 420 | 476 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
| Dere01g0090 | 533 | Pfam | WRKY DNA -binding domain | 239 | 295 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
| Dere01g0090 | 533 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 137 | 492 | IPR044810 | GO:0003700 | |
| Dere01g0090 | 533 | MobiDBLite | consensus disorder prediction | 310 | 331 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dere01g0090 | Dere-ChrDere01 | 4312352 | 4316111 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dere01g0090 | 9 | 530 | WRKY Transcription Factor Family | AT2G03340 | 50.929 | 6.29e-150 | 438 |
Transcription factors information