Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere01g0060 | ATGTCTTCTGATTCTGAAGCCAACTTCACCGATTCATCATCTCTTACTGCATTGCAATTGGATGAGCCTCAAATTCGAAGATTGTCTCTACTTCTCCCTCTGATTCTTGGGTTAGCACCTCCTCGTCAAACCCCAGAATCCGAGACTGCTAGCCACCGTGGTCGAGTCCGGATCATCATAGTTGACCCTTCTGCTGGAGCCATGATCGTGATCGAAGGCTCTGGAGATCTCCAATCCATGTTCCAAGGGCTATCGGGGAAGTCCGGGGTGTTGCCGGCGTCCAAGGACTCGATTCAAGCCATGCCCAGAGTTGAGGTGACCGAAGAAGGCACGGATTGTTCGATCTGCTTGGAAGCTTACGATGTAGGCGGCGAAGCTAGGGAGATGCCTTGCAAGCATAAGTTTCACTCTGGGTGTATTGAGAAGTGGTTAGGGCTCCATGGGTCGTGCCCAATCTGCCGGTTTCTGATGCCGGTGGAGGAAGAAAACAAAAGCGCCGCCGGAAGCGACGGGGAGCAAGACGGCGGCGAGAGGAGGGAGAGCGATGAGGGGTTGGTGTCTGTGAGTGTATGGGTTAGATCCATCGACGAAGATGATGATCCGATGGATGTGGATTCGGAGGCGGAACATGGATCCGGGGAATCCAATAGTGATTCTCGAGGGGGAAATTCTGCAGTTGATGATGACTCATCGATGAATCAGGAGCCGCAAGACATGGAATTCTGA | 726 | 0.5262 | MSSDSEANFTDSSSLTALQLDEPQIRRLSLLLPLILGLAPPRQTPESETASHRGRVRIIIVDPSAGAMIVIEGSGDLQSMFQGLSGKSGVLPASKDSIQAMPRVEVTEEGTDCSICLEAYDVGGEAREMPCKHKFHSGCIEKWLGLHGSCPICRFLMPVEEENKSAAGSDGEQDGGERRESDEGLVSVSVWVRSIDEDDDPMDVDSEAEHGSGESNSDSRGGNSAVDDDSSMNQEPQDMEF | 241 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere01g0060 | 241 | FunFam | E3 ubiquitin-protein ligase RNF181 | 82 | 160 | - | - | |
Dere01g0060 | 241 | ProSiteProfiles | Zinc finger RING-type profile. | 113 | 154 | IPR001841 | - | |
Dere01g0060 | 241 | MobiDBLite | consensus disorder prediction | 215 | 241 | - | - | |
Dere01g0060 | 241 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 84 | 159 | IPR013083 | - | |
Dere01g0060 | 241 | MobiDBLite | consensus disorder prediction | 165 | 184 | - | - | |
Dere01g0060 | 241 | SMART | ring_2 | 113 | 153 | IPR001841 | - | |
Dere01g0060 | 241 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 52 | 158 | - | - | |
Dere01g0060 | 241 | MobiDBLite | consensus disorder prediction | 164 | 241 | - | - | |
Dere01g0060 | 241 | Pfam | Ring finger domain | 112 | 154 | IPR001841 | - | |
Dere01g0060 | 241 | SUPERFAMILY | RING/U-box | 106 | 159 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere01g0060 | Dere-ChrDere01 | 3767683 | 3768408 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere01g0060 | 1 | 193 | C3H Transcription Factor Family | AT1G26800 | 40.306 | 3.38e-40 | 135 |