Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0035 ATGGCGTGTGCGATGAAGAAGGTGGATAAGATTCGCCAAATCGTGCGTCTCAAGCAGATGATGATGCGCTGGAAACACCTCAGCCTCCGACGCCGTTCCGTCCTCTCTTATTCCGATTCCGAATCTGACTGCTATCCCCTTCGCCGTACTCCCTCTGGATTTCTCGCCGTCTACATTGGCCTCGAGCGCAAGCGCTTCGTAATCCCCGCCCGCTTCCTGAACCTCCCGATCTTCCTCGGCCTTCTTAAGAAAGCCGAAGAGGAGTTTGGATTTCAGACCAATGGGGGTCTGGTTCTGCCCTGTGATGTCCCTTTCTTCACCCAAATCATCAAGTACCTTGACGCCGACGAACACAGATACGGCAAGTTCTCTTTGGACGACTTTGTCAAGTTTGTCTCCGACGTGGCTTCCGATTCTTGCAAGGAAACCAGCCTCGCTTTCACCCCTCTGCTTCAGAAGGCAAGCGTTTGA 471 0.5329 MACAMKKVDKIRQIVRLKQMMMRWKHLSLRRRSVLSYSDSESDCYPLRRTPSGFLAVYIGLERKRFVIPARFLNLPIFLGLLKKAEEEFGFQTNGGLVLPCDVPFFTQIIKYLDADEHRYGKFSLDDFVKFVSDVASDSCKETSLAFTPLLQKASV 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0035 156 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 31 108 IPR003676 GO:0009733
Dere01g0035 156 Pfam Auxin responsive protein 16 113 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0035 Dere-ChrDere01 3511924 3512394 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0035 6 120 Calmodulin-binding Proteins AT2G24400 37.121 1.14e-23 89.7