Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0026 ATGGGACACCTAACCCCATCCAGTCCCAATATATATAACCAAACTCATTACCATCTTTCTTCAACCGCTCCACCCCGCCATCTCTCTTACTCATTTCCCCTCCCTTCTCTCCATCTCCAACTTACTCCCAAAAAAATGGGTCATCTTCTCATCAAGAAAACAATCTCTTGCACTCTAATCACAGTGGCTCTTATTGCAATTATCGTAAAGTTCTCTCCATCCTTTCTCTCGATTGCTGCCTTCATCTTTCCTCTGATCCTTTACCTGAAGCAGCAAAAGAGGCAGTCAGCCAATCTGCCTCCAGGCCCTGTCTCTGTCCCTATCTTTGGAAATTGGCTTCAAGTTGGGAATGACCTGAACCACCGTCTTCTAGCTTCCATGTCACAAACCTATGGCCCCGTATTCCTACTCAAACTTGGCTCCAAGAACCTAGTGGTGGTCTCCGATCCTGAGCTTGCCACCCAAGTGCTTCACTCACAAGGTGTTGAATTTGGTTCACGCCCGCGAAACGTTGTGTTTGACATCTTCACAGGAAATGGCCAAGACATGGTCTTCACGGTCTATGGTGACCACTGGCGCAAAATGCGTAGAGTGATGACACTCCCATTTTTCACCAACAAGGTTGTCCACCAATATAGTGACATGTGGGAACAAGAGATGGACTTGGTTGTGAGCGACCTCAAAACTAACGAGACTGTGAGAAGCCAAGGGATAGTGATCAGAAAGCGTCTGCAGTTGATGCTGTACAATATCATGTACAGGATGATGTTTGATGCCAAGTTTGAGTCTCAAGAGGACCCCATGTTCATTGAGGCCACCAGATTCAACTCTGAAAGAAGCCGCTTGGCACAGAGTTTTGAGTATAATTACGGAGACTTTATCCCTTTGCTCAGACCTTTTCTGAAGGGCTATCTCAGTAAGTGCAGGGACTTGCAAACCAGGAGGCTCGCATTTTTCAACAATCACTATGTTCAACAAAGAAGGAAAATAATGGCTGCCAATGGGGAGAAGCACAAGATAAGCTGCGCAATTGACCACATCATAGATGCTCAGATGAAGGGAGAGATCAGTGAAGAGAACGTGCTTTACATAGTGGAGAACATCAACGTCGCAGCAATAGAGACGACCTTATGGTCGATGGAGTGGGCAATAGCAGAGTTGGTGAACCATCCAAGGGTACAAAACAGGATTCGTGAAGAGATCTCACAAGTGCTTAAAGGCCAGCCAGTGACAGAATCAAACCTGAATGAGCTACCATATTTGCAAGCCACAGTGAAAGAGACTCTAAGGCTGCATACCCCAATTCCTCTGTTGGTGCCCCACATGAACCTTGAAGAAGCAAAGCTAGGAGGGTATAGCATACCAAAAGAGTCAAAGGTGGTGGTGAATGCATGGTGGCTAGCAAACAACCCAGCATGGTGGGAAAAACCAGAAGAGTTCAGGCCAGAGAGGTTCATGGAAGAGGAAAGTGGGACAGATGCAGTGGCAGGTGGGAAGGTTGATTATAGGTATTTACCTTTTGGTGTCGGGAGGAGAAGTTGCCCTGGGATCATACTTGCATTGCCAATACTGGGCCTAGTGGTTGCAAAGTTGGTATCAAATTTTGAGATGGAAGCTCCTCAAGGGACCAAGGTAGATGTCAGTGAAAAGGGAGGCCAATTCAGCTTACACATTGCCAGCCACTCAACTGTCCTCTTCCATCCAATCAAGGCATGA 1716 0.4668 MGHLTPSSPNIYNQTHYHLSSTAPPRHLSYSFPLPSLHLQLTPKKMGHLLIKKTISCTLITVALIAIIVKFSPSFLSIAAFIFPLILYLKQQKRQSANLPPGPVSVPIFGNWLQVGNDLNHRLLASMSQTYGPVFLLKLGSKNLVVVSDPELATQVLHSQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRVMTLPFFTNKVVHQYSDMWEQEMDLVVSDLKTNETVRSQGIVIRKRLQLMLYNIMYRMMFDAKFESQEDPMFIEATRFNSERSRLAQSFEYNYGDFIPLLRPFLKGYLSKCRDLQTRRLAFFNNHYVQQRRKIMAANGEKHKISCAIDHIIDAQMKGEISEENVLYIVENINVAAIETTLWSMEWAIAELVNHPRVQNRIREEISQVLKGQPVTESNLNELPYLQATVKETLRLHTPIPLLVPHMNLEEAKLGGYSIPKESKVVVNAWWLANNPAWWEKPEEFRPERFMEEESGTDAVAGGKVDYRYLPFGVGRRSCPGIILALPILGLVVAKLVSNFEMEAPQGTKVDVSEKGGQFSLHIASHSTVLFHPIKA 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0026 571 PRINTS P450 superfamily signature 423 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g0026 571 PRINTS P450 superfamily signature 371 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g0026 571 PRINTS P450 superfamily signature 505 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g0026 571 SUPERFAMILY Cytochrome P450 100 557 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g0026 571 PRINTS E-class P450 group I signature 128 147 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g0026 571 PRINTS E-class P450 group I signature 422 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g0026 571 PRINTS E-class P450 group I signature 504 514 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g0026 571 PRINTS E-class P450 group I signature 380 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g0026 571 PRINTS E-class P450 group I signature 152 173 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g0026 571 PRINTS E-class P450 group I signature 247 265 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g0026 571 PRINTS E-class P450 group I signature 514 537 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g0026 571 PRINTS E-class P450 group I signature 360 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g0026 571 PRINTS E-class P450 group I signature 463 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g0026 571 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 80 570 - -
Dere01g0026 571 Pfam Cytochrome P450 100 558 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere01g0026 571 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 507 516 IPR017972 GO:0005506|GO:0016705
Dere01g0026 571 FunFam Trans-cinnamate 4-monooxygenase 89 563 - -
Dere01g0026 571 Gene3D Cytochrome P450 89 563 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0026 Dere-ChrDere01 3425401 3427217 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0026 109 568 Monolignol Biosynthesis Gene Families AT2G30490 64.579 0.0 638