Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0019 ATGTTAAGCAGGCCGCTATATAGTTTGCGGAAGAGCATATCGCTTCTATTTCCCAAAGTCTTGTTGAAGATTACTTTGAGCTGCTTTCTTGTAAGGCAATTACAATCCAGAAGGATGTCGAGGTTGATTCCTGAGAAGAAGTTGGGTGCAGGGCGTGTGGTTGCAGTGGCCATTGAGAATAACAAGACAAGCCAATACGCTGCAAAATGGGCAGTTGATAATCTTGTTCCTAAAGATCAATGTCTTCTACTGATCCATGTTAGACAAAGGGCATCTTCCACTCCACCAACGGGAAACCTTGTAGCCATCGATTTGAACGATGATGTTGCTAGAGCATACAGACAGCAATTCGACAACGAATCCAGGGAGCTTTTTGCTTCATTTCGTGTTTTCTGCACTAGAAAAAGTGTACAATGCAAAGAAGTCTTATTGGAAGGTGCGGATATACCTAAAGCATTAATAGAATGTGTCTCCGCGAACACAGTTGAGCTTCTGGTACTTGGGGCACCATCAAGAAGTGGTATAGTCAGAAGATTTAGAACAACAGATGTTCCAAGCGTTGTGTCGAAAGGGGCACCGCCATTCTGCACTGTGTATGTCATCTCCAAAGGAAAAATCTCATCCGTACGAGCTGCTTCGGCTCCACTCACAGCCAAACCTACACCTATTAACGTATTGCAGCAACAACCCAGCCAGAGTTCTGATCGGATGGATGCACAACTGATGCGCAACCAAACACCACGCTCAGCAGAGAGGTCACCACACGGCACCCGCCTGCCACCAGATGATGATGACATCTTATCACCGTTCACAAGAGGAGGTAGATCAAGCTACAAATCATACAAGTCCTCAATCCCTGACTCTGATATATCATTTGTGAGCGGCGGAAGGCCAAGCATTGATCAGATGTTTCCTTTAACGTATGACGATTTCGATCATGGAATGGCCCCAAGACTTTCGAGCAGCTCAGAGTTTGATGTTAGAAGCTTTGAGTCATCTGTCTCAGGAGCTAAGTCAGTTGATACAAACTATTCCCACGGTGACTACTCATTCAGCTCGCAAGATAGTGAATCGCCATCATCAAGACTCTCCCAGACGGATGATGTGGAGGCCGAGATGAGGAGACTGAAGCTAGAACTGAAGCAAACGATGGAAATGTACAGTACAGCATGCAAAGAAGCTCTCACAGCAAGGCAGAAGGCAATGGAACTTCAGCGTTGGAAATTGGAGGAGCAAAAGAAATTAGAGGACGCGAGGATAGCTGAAGAAGCGGCATTGGCACTTGCAGAGAGGGAGAAAGCAAAGTGTAGAGCAGCCCTTGAGGCAGCAGAAGCTTCTAAAAAAATTGCGGAACTGGAGGCACAAAAAAGATTAAATGCAGAGATGGTAGCCCTGAGAGACTCTGATCAGAAAAAGAAGGCCCTAGATACTTTTCCACAAGGTAGTGCCAGGTACAGAAGATATAGTATTGAGGAAATTGAAGAAGCAACAAATTGCTTTGAGGACTCGCGCAAGATTGGGGAAGGAGGGTATGGGCCAGTATATAGGTGTGAATTAGATCACACGCCAGTTGCAGTAAAAGTTTTGAGGCCAGATGCAGCTCAAGGGAGGTCACAGTTTCAGCAGGAGGTTGAAGTGTTAAGTTGCATACGACATCCAAACATGGTTCTCCTGCTCGGAGCATGCCCAGAGTATGGTTGCCTAGTGTACGAGTACATGGCTAACGGAAGCTTGGAAGACTGCCTCTTCCAGAAAGGCAACAGACCACCTCTTACCTGGCAGTTGAGATTCCGCATTGCTGCAGAGATTGCCACTGGCCTCCATTTCCTTCATCAGACAAAACCAGAACCACTTGTTCACCGTGACTTAAAACCTGGCAACATCTTGCTTGATCGTAACTTTGTCAGCAAGATTAGTGACGTGGGATTGGCCAGGCTTGTCCCTCCGTCAGTTGCAAACAGTGTAACTCAGTATCGCATGACAGCCACTGCTGGAACTTTCTGTTATATTGATCCAGAGTACCAGCAAACTGGCATGCTCGGAATTAAATCTGACATTTACTCACTGGGGGTCATGCTTCTACAAATCATAACAGCAAGGCCACCAATGGGTTTGACTCATCATGTTGCACGAGCTATTGAAAAAGGCACTTTCACTGAGATGCTTGACCCAGCTGTCGAAGACTGGCCAGTAGAGGAGGCCCTACATTTTGCCAAGCTTGCTCTGCAGTGTGCAGAAATGAGGAGAAAAGATAGACCTGATCTTAAAAAAGTTGTATTGCCTCAGCTCAATATATTGAGAGACTTTGCCGAAGAAAACATGCCCATGATGATGATGTTCGGACTTCCGACAGTATTCTCTCCCAGAAGTAGCAACAATTCCACGACTTCCACAGTTCCAGATATTTTGAGTGATTCCCAGTCACAGTCCGGAATCTCCGAATATGAAAGCCACTCAAGCACATCCTCAATGGGGAAAATATCAAGTGCAGGGAGGATTACTGAAGAATGTTGGTCAATGGGGCCCAGGAGACAAAGAGAAGGCATTGAATCTCGATTGACGACAGCATGA 2571 0.4605 MLSRPLYSLRKSISLLFPKVLLKITLSCFLVRQLQSRRMSRLIPEKKLGAGRVVAVAIENNKTSQYAAKWAVDNLVPKDQCLLLIHVRQRASSTPPTGNLVAIDLNDDVARAYRQQFDNESRELFASFRVFCTRKSVQCKEVLLEGADIPKALIECVSANTVELLVLGAPSRSGIVRRFRTTDVPSVVSKGAPPFCTVYVISKGKISSVRAASAPLTAKPTPINVLQQQPSQSSDRMDAQLMRNQTPRSAERSPHGTRLPPDDDDILSPFTRGGRSSYKSYKSSIPDSDISFVSGGRPSIDQMFPLTYDDFDHGMAPRLSSSSEFDVRSFESSVSGAKSVDTNYSHGDYSFSSQDSESPSSRLSQTDDVEAEMRRLKLELKQTMEMYSTACKEALTARQKAMELQRWKLEEQKKLEDARIAEEAALALAEREKAKCRAALEAAEASKKIAELEAQKRLNAEMVALRDSDQKKKALDTFPQGSARYRRYSIEEIEEATNCFEDSRKIGEGGYGPVYRCELDHTPVAVKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLEDCLFQKGNRPPLTWQLRFRIAAEIATGLHFLHQTKPEPLVHRDLKPGNILLDRNFVSKISDVGLARLVPPSVANSVTQYRMTATAGTFCYIDPEYQQTGMLGIKSDIYSLGVMLLQIITARPPMGLTHHVARAIEKGTFTEMLDPAVEDWPVEEALHFAKLALQCAEMRRKDRPDLKKVVLPQLNILRDFAEENMPMMMMFGLPTVFSPRSSNNSTTSTVPDILSDSQSQSGISEYESHSSTSSMGKISSAGRITEECWSMGPRRQREGIESRLTTA 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0019 856 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 472 572 - -
Dere01g0019 856 MobiDBLite consensus disorder prediction 789 856 - -
Dere01g0019 856 Coils Coil 846 856 - -
Dere01g0019 856 MobiDBLite consensus disorder prediction 336 366 - -
Dere01g0019 856 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Dere01g0019 856 SMART serkin_6 500 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0019 856 MobiDBLite consensus disorder prediction 336 369 - -
Dere01g0019 856 ProSiteProfiles Protein kinase domain profile. 500 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0019 856 Coils Coil 392 453 - -
Dere01g0019 856 Pfam Universal stress protein family 52 185 IPR006016 -
Dere01g0019 856 FunFam U-box domain-containing protein 51 573 773 - -
Dere01g0019 856 MobiDBLite consensus disorder prediction 220 252 - -
Dere01g0019 856 SUPERFAMILY Protein kinase-like (PK-like) 479 759 IPR011009 -
Dere01g0019 856 MobiDBLite consensus disorder prediction 220 282 - -
Dere01g0019 856 Pfam Protein kinase domain 500 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0019 856 CDD STK_N 53 204 - -
Dere01g0019 856 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 54 185 - -
Dere01g0019 856 Gene3D Transferase(Phosphotransferase) domain 1 573 778 - -
Dere01g0019 856 CDD STKc_IRAK 506 759 - -
Dere01g0019 856 MobiDBLite consensus disorder prediction 789 829 - -
Dere01g0019 856 Gene3D Phosphorylase Kinase; domain 1 470 572 - -
Dere01g0019 856 Coils Coil 366 386 - -
Dere01g0019 856 PANTHER OS02G0152300 PROTEIN 53 826 - -
Dere01g0019 856 Gene3D HUPs 52 202 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0019 Dere-ChrDere01 3353191 3357956 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0019 54 811 Receptor kinase-like Gene Family AT5G35380 56.110 0.0 763
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Dere01g0019 Pkinase 1.9e-40 CL0016