Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0005 ATGCATCTTGGTGTTCTAGCTCCTGCATCTCATGCCATTTCAACTGGAACTCTGTTTTCTGTATTTTACAAGCCCAGAACAAGCCGATCAGAGTTTATTGTGAGCGTCAACAAGTATCTTGAAGCTAGGAGTCATAAGTTTTCCGTTGGGATGCGATTCAAGATGAGGTTTGAGGGTGATGAAGTTCCTGAAAGAAGGTTTAGTGGTATGATTGTTGGTGTTGGAGATAATATATCACCTGTCTGGGCTAATTCTGAGTGGCGCTCATTAAAGGTGCAATGGGATGAACCGTCTTCGATCTTGCGTCCTGATAGAGTTTCTCCATAG 327 0.4312 MHLGVLAPASHAISTGTLFSVFYKPRTSRSEFIVSVNKYLEARSHKFSVGMRFKMRFEGDEVPERRFSGMIVGVGDNISPVWANSEWRSLKVQWDEPSSILRPDRVSP 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0005 108 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 108 IPR044835 GO:0003677|GO:0006355|GO:0009725
Dere01g0005 108 Pfam Auxin response factor 9 91 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Dere01g0005 108 Gene3D - 46 108 - -
Dere01g0005 108 FunFam Auxin response factor 46 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0005 Dere-ChrDere01 3069337 3069663 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0005 1 108 B3 DNA Binding Superfamily AT1G59750 78.704 5.34e-57 184