Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g03037 ATGAATCTTGATACTTGTTTGTGCCTCGGTCTCTTTGGTGGTTGGTATAATAATAATGGAAGGATGCTCAAAGGGTGCAGTGGTGCACAGGATGGAATTGGTATGGTGGCAAGCATATTGCTTGTAGTGTTTGTTATTGCAACAAGTGATTCTAGACAAACACTACAGTTTAAGGATCTAGATAAAGAGAAATGGGGTTGTGGACAGAAGCTTTCAATATATGATATGCTTCCTAGTGATATTGATATTGATATTGTCCATTAA 264 0.375 MNLDTCLCLGLFGGWYNNNGRMLKGCSGAQDGIGMVASILLVVFVIATSDSRQTLQFKDLDKEKWGCGQKLSIYDMLPSDIDIDIVH 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g03037 87 PANTHER CATION TRANSPORTING ATPASE 26 81 - -
Cca11g03037 87 PANTHER CALCIUM-TRANSPORTING ATPASE 26 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g03037 Cca-Chr11 57538132 57538395 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g03037 28 81 Primary Pumps ATPases AT4G37640 63.492 9.12e-19 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g03037 K01537 - gmx:100810758 81.6481