Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g03030 ATGGCAAGCGCAAGTGTTGGTGAAGAAGAAGATAATAACAAACTGACGCTCTATTCGTATTGGAGAAGCAGTTGTTCCTTCCGAGTCCGAATCGCTCTCAACCTCAAAGGACTCAAATACCACTACAAGCCCGTCAATCTGTTGAAGGGAGAACAATCTCGCCCCGAGTTTCTCCAGCTCAACCCCGTTGGCTTTGTTCCCGTTCTGCTGGATGGCCACACCGTTCTCTATGACTCTTTCGCCATTATTATGTATTTGGAAGATAAGTATCCTCACAATCCTTTGCTCCCTCTTGATATTACTAAGAGAACCATCAATTTCCAGGCTGCTACTATTGTCTCCTCAACAATACAACCTCTTACAAACTTAAATTTACTGAACTACATTGGGGAAAAAGTTGGCCCTGATGAAAAACTTCCTTGGATCCTAAGTGTATTTCGAAGAGGCTTTACAGCACTTGAAAAGTTATTGAAAGACCACACAGGAAGATATGCAACTGGAGATGAAGTTTTCCTGGCAGATGTATTTTTAGCACCTCAGTTACATGCAGCATTTAAGAGATACAGCGTTAACAAGGACGAAGAACCAGCCAGATGCAGTACACTAGTTGGACCTAATTTGGGACTGAAATGTGACCTGATAGTTGGAGAAATTGCACCAGGAGCTTTGAATTTGTTGTTAAATTATAAAAAGATACTCAATATAGCAATAAGGTTGCATAATTACATAGGGGAAAAAGTTGGTCCTGATGAAAAACTTCCCTGGACCCAAAGTGCAATTAGAAAAGGCTTCACAGCACTTGAAAACCTGTTGAAAGATCATGCAAGAAGATATGCAACTGGAGATGAAATTTACCTGGCTGATTTGTTTTTAGCACCTCAGATAGATGCAGCAATTAATATATTCAAAGTTGACATGGTATTGTTCTGTCTATGGTTCAACGTGTACCATTTTGGTGGGGAATGA 966 0.4058 MASASVGEEEDNNKLTLYSYWRSSCSFRVRIALNLKGLKYHYKPVNLLKGEQSRPEFLQLNPVGFVPVLLDGHTVLYDSFAIIMYLEDKYPHNPLLPLDITKRTINFQAATIVSSTIQPLTNLNLLNYIGEKVGPDEKLPWILSVFRRGFTALEKLLKDHTGRYATGDEVFLADVFLAPQLHAAFKRYSVNKDEEPARCSTLVGPNLGLKCDLIVGEIAPGALNLLLNYKKILNIAIRLHNYIGEKVGPDEKLPWTQSAIRKGFTALENLLKDHARRYATGDEIYLADLFLAPQIDAAINIFKVDMVLFCLWFNVYHFGGE 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g03030 321 Pfam Glutathione S-transferase, C-terminal domain 143 187 - -
Cca11g03030 321 SUPERFAMILY GST C-terminal domain-like 236 306 IPR036282 -
Cca11g03030 321 PANTHER MALEYLACETOACETATE ISOMERASE 239 316 - -
Cca11g03030 321 PANTHER GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 239 316 - -
Cca11g03030 321 SUPERFAMILY GST C-terminal domain-like 94 196 IPR036282 -
Cca11g03030 321 ProSiteProfiles Glutaredoxin domain profile. 3 103 - -
Cca11g03030 321 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 99 258 IPR010987 -
Cca11g03030 321 Gene3D - 98 201 - -
Cca11g03030 321 Gene3D - 218 316 - -
Cca11g03030 321 PANTHER MALEYLACETOACETATE ISOMERASE 11 194 - -
Cca11g03030 321 SUPERFAMILY Thioredoxin-like 13 97 IPR036249 -
Cca11g03030 321 SFLD Glutathione Transferase (cytosolic) 15 189 IPR040079 -
Cca11g03030 321 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 13 94 IPR004045 -
Cca11g03030 321 Gene3D Glutaredoxin 12 97 - -
Cca11g03030 321 PANTHER GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 11 194 - -
Cca11g03030 321 TIGRFAM maiA: maleylacetoacetate isomerase 16 196 IPR005955 GO:0003824|GO:0005737|GO:0009072
Cca11g03030 321 CDD GST_N_Zeta 15 87 IPR034333 -
Cca11g03030 321 Pfam Glutathione S-transferase, N-terminal domain 17 94 IPR004045 -
Cca11g03030 321 SFLD Main (cytGST) 15 189 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g03030 237 309 Glutathione S-transferase Gene Family AT2G02380 56.164 3.61e-19 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g03030 K01800 - gmx:547590 329.331