Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g03017 ATGTGGACTGGAAAGCATTCAATTTTCCTCTTACTCTCCTTCATTCTCTTTTATGTGTTCCATGCACCTGCTTTTGCGATCAAAAAGTCTTACATAGTGTACATGGGATCTCATAACCATGGTGAAGGAGCCACAGATGCTGATTTTCATCGAGTTACACAAACTCATCATGAATTCCTTCAATCCTATGTAGGAAGTAATGAGAAAGCAAAAGAGTCAATAATATATTCTTACACAAGGCATATCAATGGCTTTGCTGTCATGCTGGAAGAGGAAGAGGCCGCGGAGATTGCAAAGCATCCAGACGTTGTGTCAGTTTTCTTAAACAAAGGAAGAAAATTGCATACTACTCATTCGTGGCAATTCATGGAGCTGGAACGGAATAATGGGGTGATTCCCCCTGATTCCCTGTTTAGAAAAGCCAGATATGGTGAAGATACTATTGTTGCGCATCTTGACACTGGTGTATGGCCAGAATCTCCGAGCTTTAGAGATGAGGGGATGGGACCCATACCATCAAGGTGGAAAGGAACTTGTCAACATGATATCACCGGCTTCCGTTGCAACAGGAAGCTGATAGGAGCAAGGTTCTTCAACAAAGGTTACATTGCCTTTGCGGGAGCCGCAAAAGTCAACAGCTCAGTCAACACAGCACGAGACTATGAGGGCCATGGATCTCACACACTCTCAACAATAGGAGGAAACTTCGTTCCTGGTGCAAATGTATTTGGGTATGGTAATGGAACTGCTGAAGGTGGTTCTCCTAGGGCCAGGGTTGTTACTTACAAGGTGTGCTGGCCAGAAATTGATGGTAATGAGTGCTTTGATGCTGACATCATGGCAGCCTTTGACATGGCCATACATGATGGGGTTGATGTTCTTTCTCTCTCTCTTGGAGGGAGTCCTGCGGATTACTTTGATGATGGCCTTGCAATTGGGGCCTTTCATGCTAACATGAGGGGCATCCCTGTCATATGCTCTGCTGGAAATTCGGGACCAACACCTGGCACTGTTTCAAATGTTGCACCTTGGATATTAACAGTTGGTGCAAGCACCTTGGACAGAAAGTTTGACACTGTTGTTGAACTCCACAATGGAAAGAGCTTCAAGGGAGCAAGCCTTTCTAGACCTTTGCCAGAACACAAGCTTTATCCTCTCATCAATTCTGCAGATGCAAAGTTGGCTCATGAATCAATTGAAAACGCTACTCTCTGTTTGCGAGGAACAATTGACCCTGAGAAGGTGAAGGGCAAAATATTGGTTTGCCTTAGAGGTATCATTGCAAGAGTGGAAAAGGGACTGGTTGCTTTGGAGGCTGGTGCAGCTGGGATGATTCTTTGTAATGACAAGCTCAGTGGTAATGAGCTTATTGCTGATCCTCATCTTCTGCCAGCATCACAAATTAATTATGAAGATGGTCTTGCTGTCTATGCCTACTTGAACTCAACCAAGAATCCTCTAGGATATATTGATCCACCCACGACCAAATTGGGGATAGAGCCTGCTCCAAGCATGGCATCTTTCTCCTCTAGAGGACCCAATACAGTCACACCAGAGATTCTCAAGCCTGATGTCACTGCTCCTGGTGTGAACATTATTGCTGCGTACTCAGAAGGGATTAGCCCAACAGAAATGAGTTTTGATAAGCGCAGGATTCCTTTTATCACCATGTCTGGAACTTCCATGTCTTGTCCTCATGTGGCTGGAGTTGTTAGCCTTCTCAAGACTCTCCACCCTGACTGGAGTCCAGCGGCTATTAAATCTGCAATAATGACAACTACTAGGACAAGGGACAACACTGGTAAGCCAATGCTTGATGGGAATTCTGAGAAGGCAACGCCATTTGCTTATGGGTCTGGGCACATCAGACCAAACCGTGCCATGGATCCGGGGTTGGTGTATGACTTGAACAACAATGACTACCTAAACTTTCTTTGTGTCACTGGCTATAACCATACTCAGATAAAAGCATTCTCTGGTGCTCCTTATCATTGTCCTGATGTAATAAGAATCCTGGATTTCAACTACCCTTCAATAACAATACCAGTACTGTACGGCTCAGTTAGTTTGACACGGAGAGTGAAAAATGTTGGGTCACCAGGCACTTACATCGCAAGGCTTAAAGCACCAGAAGGTGTTTCCGTAATTGTGGAGCCTGGAAAGTTGAAATTTGACAAAATTGGTGAAGAGAAGAGCTATAAGTTGACAGTGGAAGTAGAGAGACCAGGTGTGGGAACATCATTTGGAAGAATAACTTGGTCCGATGGCAGACATGAAGTGATGAGTCCAATTGTGGTTGGGGGAGTTAGAGGGTAG 2316 0.4478 MWTGKHSIFLLLSFILFYVFHAPAFAIKKSYIVYMGSHNHGEGATDADFHRVTQTHHEFLQSYVGSNEKAKESIIYSYTRHINGFAVMLEEEEAAEIAKHPDVVSVFLNKGRKLHTTHSWQFMELERNNGVIPPDSLFRKARYGEDTIVAHLDTGVWPESPSFRDEGMGPIPSRWKGTCQHDITGFRCNRKLIGARFFNKGYIAFAGAAKVNSSVNTARDYEGHGSHTLSTIGGNFVPGANVFGYGNGTAEGGSPRARVVTYKVCWPEIDGNECFDADIMAAFDMAIHDGVDVLSLSLGGSPADYFDDGLAIGAFHANMRGIPVICSAGNSGPTPGTVSNVAPWILTVGASTLDRKFDTVVELHNGKSFKGASLSRPLPEHKLYPLINSADAKLAHESIENATLCLRGTIDPEKVKGKILVCLRGIIARVEKGLVALEAGAAGMILCNDKLSGNELIADPHLLPASQINYEDGLAVYAYLNSTKNPLGYIDPPTTKLGIEPAPSMASFSSRGPNTVTPEILKPDVTAPGVNIIAAYSEGISPTEMSFDKRRIPFITMSGTSMSCPHVAGVVSLLKTLHPDWSPAAIKSAIMTTTRTRDNTGKPMLDGNSEKATPFAYGSGHIRPNRAMDPGLVYDLNNNDYLNFLCVTGYNHTQIKAFSGAPYHCPDVIRILDFNYPSITIPVLYGSVSLTRRVKNVGSPGTYIARLKAPEGVSVIVEPGKLKFDKIGEEKSYKLTVEVERPGVGTSFGRITWSDGRHEVMSPIVVGGVRG 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g03017 771 ProSiteProfiles Serine proteases, subtilase domain profile. 119 628 - -
Cca11g03017 771 PANTHER PEPTIDASE S8 13 767 - -
Cca11g03017 771 CDD PA_subtilisin_like 360 490 - -
Cca11g03017 771 ProSitePatterns Serine proteases, subtilase family, serine active site. 559 569 IPR023828 -
Cca11g03017 771 Pfam Subtilase family 144 618 IPR000209 GO:0006508|GO:0008236
Cca11g03017 771 Pfam Fibronectin type-III domain 673 766 IPR041469 -
Cca11g03017 771 Gene3D Peptidase S8/S53 domain 146 641 IPR036852 GO:0004252|GO:0006508
Cca11g03017 771 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 115 IPR037045 -
Cca11g03017 771 Gene3D - 645 768 - -
Cca11g03017 771 CDD Peptidases_S8_3 113 593 IPR034197 -
Cca11g03017 771 Gene3D - 354 497 - -
Cca11g03017 771 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Cca11g03017 771 PRINTS Subtilisin serine protease family (S8) signature 220 233 IPR015500 -
Cca11g03017 771 PRINTS Subtilisin serine protease family (S8) signature 558 574 IPR015500 -
Cca11g03017 771 Pfam PA domain 405 475 IPR003137 -
Cca11g03017 771 SUPERFAMILY Subtilisin-like 114 632 IPR036852 GO:0004252|GO:0006508
Cca11g03017 771 SUPERFAMILY PA domain 412 474 IPR046450 -
Cca11g03017 771 Pfam Peptidase inhibitor I9 30 115 IPR010259 -
Cca11g03017 771 PANTHER BNAC02G33520D PROTEIN 13 767 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g03017 Cca-Chr11 57335860 57341326 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g03017 19 766 Subtilisin-like Serine Gene Family AT5G59810 63.600 0.0 979
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g03017 - - gmx:100808488 1303.12