Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g03007 ATGTGGCTGCTTAGTGCATTTCAAAAAGAACAAACCTGCGTCATAAGCGTTTCTTTCATACTTTGCAATAAAATTTTCATTCATTCGCTTCGACCTTATAAAGTAAGTTCTAAACCCATGGACAACTATGGCTATAGAAGCAGCAGCGTGTGTGAGATAGAGGAGGAAGAAGACGACAAGCATGATAATAAGGCTATTGGCACCATTCACGGTGAAGAAGAAGATTGTGTTTATGTAGCAGTTGGCAAGAGCCACACTAGCATGGACGCTCTCTCTTGGACACTCAAGCAATTGGCCACCCAATCTACCATCATACACGTGTTCCCTCAGATCAACCACATTCCTAATCCATTGGGAGTAGGAATGATTCCAAGGAATCAAGTGAGCGGTGAGCAGGTGGAGAGTTATATTGCACAAGAAAGGGGAAAGAGGAGAGAGCTCCTTCAGAAATTCCTACAATCCTGCACTAATTCCAAGGTTAAGGTAGACACCATCCTGATTGAGAGTGACTTAGTTGCAAAGGCCATCCTCGACCTCATTCCCATTCTTCAAATAAGAAATCTAGTCATTGGAGTCAACAAAAGAAAATCAAAATCAAGAAAAGGGAATAGCATAGGCGATCAGATACTGCAGAGTGCACCACAAAATTGCAAGGTGAGAATTATTTGTGAGGGGAAGGAAGTAAATGAGAAGAGGATGTCACCCTCTCCACAGGCTTTTACCACTCGCACCTCTGCTAATGATAATTCCATAACTAACAAAAAAGAAGATCAACAACATGATTCTGTTTCATGCAGCATTTGTTTCATACCAAAGTTTAAATGA 825 0.4133 MWLLSAFQKEQTCVISVSFILCNKIFIHSLRPYKVSSKPMDNYGYRSSSVCEIEEEEDDKHDNKAIGTIHGEEEDCVYVAVGKSHTSMDALSWTLKQLATQSTIIHVFPQINHIPNPLGVGMIPRNQVSGEQVESYIAQERGKRRELLQKFLQSCTNSKVKVDTILIESDLVAKAILDLIPILQIRNLVIGVNKRKSKSRKGNSIGDQILQSAPQNCKVRIICEGKEVNEKRMSPSPQAFTTRTSANDNSITNKKEDQQHDSVSCSICFIPKFK 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g03007 274 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 78 214 - -
Cca11g03007 274 Gene3D HUPs 63 232 IPR014729 -
Cca11g03007 274 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 41 273 - -
Cca11g03007 274 MobiDBLite consensus disorder prediction 234 252 - -
Cca11g03007 274 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 41 273 - -
Cca11g03007 274 MobiDBLite consensus disorder prediction 230 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g03007 Cca-Chr11 57262358 57264358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g03007 76 226 U-box Gene Family AT4G25160 30.323 2.55e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g03007 - - gmx:100527773 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g03007 11 57262358 57264358 Cca08g01974 08 52488572 52490418 PCT