Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02985 ATGGAATTCCACTCTTCCTTCCTCGTTATTACCACAATCTTCTTGTTCCTGCTTTGGCTTGCAAAGACTTACAAGCAAGCAAAAAGTGTGGTTCATAAGCATAAGCATAAGCTACCCCCAGGTCCATGGAAGCTTCCTCTAATAGGGAACCTTCATCAAGTAGCAGGTGCAGGCACACTTCCACACCACACCCTTCAAAATCTGGCCTTAAAATATGGACCTCTAATGCACCTTCAACTGGGTGAAATTTCTGCAGTGGTTGTGTCATCCCCTGACATGGCCAAAGAGATTATGAAGACACATGATCTTAATTTTGTGCAGAGGCCACAACTCCTTTGTCCCCAAATCCTAGCCTATGAATCAACAGATATTGCCTTTTCTCCATACGGTGATTACTGGAGACAGATGAGGAAAATATGCACACTAGAACTTTTCAGTGCCAAAAGGGTTCAATCATTTTCCTTCATTCGGGAAGATGAGGTGGCTAAGCTCATAAAATCCATTCAAGTATGTGCATCTGAAGCTTCACAAGTCAACGTTTCCAAAAGCGTTTTCTCTTTGGTAAGTAGTATTGTTTCAAGGGCAGCTTTGGGTAAAAAATGTGAGCATCAAGATCAACTTTTGGGTTTGCTCAAGAAAGGAGTGGAACTCTCGGGAGGGTTTGATCTCGCTGATTTGTTCCCTTCGGTGAAGCCTATTCATCTCATAACTGGGATAAAAGCTAAGTTGGAGGACATGCACAAAGAGCTTGACAACATTTTACAAAACATTATCAGCGACCATCAAACAAACTCAAACCATGGAAAGCCTGAAGCAGAAGAAGATCTCGTTGATGTTCTCTTACGCGTGCAACAAAGTGCCAACCTTCAAATCCCACTCACAATCAACAACATCAAAGCCATCATATGGGCGGACGTATTTGGGGCTGGGAGTGATACCTCAGCAACAGTACTAGAGTGGGTTATGTCAGAGCTGATGAGAAACCCAAGAGTGATGAAAAAGTTACAGGCTGAAATAAGAGAAGCTTTGGGGGGAAAGAAAACAATTGGCGAGAGTGATATACATGAATTTGGGTACATGAAGTCAGTGATAAAAGAAATCATGAGGTTATATCCACCTGCGCCTCTGTTGCTGCCAAGAGAATGCAGGGAAGCCTGTAAGATAGGTGGATATGAAATACCTGTAAAGACTAAAGTGATAGTAAATGCATGGGCACTTGGGAGAGACCCAAAGTATTGGAATGATGCAGACAAGTTTGTACCTGAGAGGTTTCATGGCACAAATTATGATTTTAAAGGGAGTAATTTTGAGTACATCCCTTTTGGGGCAGGGAGGAGAATGTGTCCTGGTTATTTACTTGGCTTGGCTAATATTGAGCTTCCTTTAGCTGCATTGCTCTATCACTTTGACTGGGAACTTCCCAATGGAATCAAACCAGAGGACTTGGATATGACTCAAACCTTTGGAGCTACTGTGGGAAGGAAAAACAACCTATATTTGCTACCCATTCCTTATCATGCCATTTCCAATTCACCCTCTTAG 1542 0.4248 MEFHSSFLVITTIFLFLLWLAKTYKQAKSVVHKHKHKLPPGPWKLPLIGNLHQVAGAGTLPHHTLQNLALKYGPLMHLQLGEISAVVVSSPDMAKEIMKTHDLNFVQRPQLLCPQILAYESTDIAFSPYGDYWRQMRKICTLELFSAKRVQSFSFIREDEVAKLIKSIQVCASEASQVNVSKSVFSLVSSIVSRAALGKKCEHQDQLLGLLKKGVELSGGFDLADLFPSVKPIHLITGIKAKLEDMHKELDNILQNIISDHQTNSNHGKPEAEEDLVDVLLRVQQSANLQIPLTINNIKAIIWADVFGAGSDTSATVLEWVMSELMRNPRVMKKLQAEIREALGGKKTIGESDIHEFGYMKSVIKEIMRLYPPAPLLLPRECREACKIGGYEIPVKTKVIVNAWALGRDPKYWNDADKFVPERFHGTNYDFKGSNFEYIPFGAGRRMCPGYLLGLANIELPLAALLYHFDWELPNGIKPEDLDMTQTFGATVGRKNNLYLLPIPYHAISNSPS 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02985 513 Coils Coil 236 256 - -
Cca11g02985 513 Pfam Cytochrome P450 39 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02985 513 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 9 505 - -
Cca11g02985 513 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02985 513 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02985 513 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02985 513 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02985 513 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02985 513 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02985 513 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02985 513 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02985 513 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02985 513 PANTHER CYTOCHROME P450 71B11-RELATED 9 505 - -
Cca11g02985 513 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02985 513 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02985 513 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02985 513 SUPERFAMILY Cytochrome P450 39 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02985 513 Gene3D Cytochrome P450 24 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02985 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02985 Cca-Chr11 57074856 57077031 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02985 33 502 Cytochrome P450 AT3G26310 45.397 5.06e-144 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02985 - - gmx:100794503 806.208