Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02976 ATGTGGAGGTCCATGCGAACCGTGCGCTCCAAACTCTTGCAACACCACACCTGCGTCTCCGACACCCTAACGCCAAACACCAAGTCCCTACAATTACGGAGGAGCTGGCTGAAGCAGGTTGGCCAGATCGGAACCTGCTGCTCACGTCGACCTCGACCTCCACCCTTCCCTTCTCTCCGCCGAGACTATCTGTATAAGGTGTGTTCGGTGAGGCGGAACAAGGAGAGGGCGGTGAGGGCGCTGGTGGAGCTGGTGGGCGAGCATGGGAGCGGGATGGCGGAGAAGGCCATGGTGGTCCTTAATAGCTTGGCGGGCATTCAGGCGGGGAGGGAGGCCATTGTTCAGGAAGCTGGGATTCCTGCCCTCGTGGAAGCCATTGAGGATGGCTCCGTCAAGGCCAAGGAGTTCGCTGTTTTCACTCTTGTTCACCTCTCTGCTCACTCTCTTCCCAATCCAGCCTTGCTTGTCAGAGAGGGTGCCATTCCTCCTCTCGTCGCTCTTTCGCAGAATGCCTCTCTTCCTGCTAAGCACAAGGCTGAGACCCTCCTTGGATATTTGAGAGAATCAAGACATGAAGCGTCCTGTTCAAGTCCTTAG 597 0.5695 MWRSMRTVRSKLLQHHTCVSDTLTPNTKSLQLRRSWLKQVGQIGTCCSRRPRPPPFPSLRRDYLYKVCSVRRNKERAVRALVELVGEHGSGMAEKAMVVLNSLAGIQAGREAIVQEAGIPALVEAIEDGSVKAKEFAVFTLVHLSAHSLPNPALLVREGAIPPLVALSQNASLPAKHKAETLLGYLRESRHEASCSSP 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02976 198 PANTHER U BOX DOMAIN-CONTAINING 63 190 - -
Cca11g02976 198 SUPERFAMILY ARM repeat 74 191 IPR016024 -
Cca11g02976 198 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 63 190 - -
Cca11g02976 198 Gene3D - 62 189 IPR011989 -
Cca11g02976 198 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 76 118 IPR000225 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02976 77 191 U-box Gene Family AT2G23140 48.696 3.50e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02976 - - ccaj:109806836 206.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02976 11 57008550 57009436 Cca08g02011 08 52932546 52934975 PCT