Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02943 ATGGCCAAAAGGAGTGTTGCTTCCATAGCTTTATCATCCCTAAGCATTTTCATTTCCATGTTCTTTGTTGCTATAACTCAAGAAGACCGATCAATATATTTGGTCTTATTGGAAGGAGACGCGCTTGCTTTTCATGAAGGTTCAAGGGACCAACATTCATCCACAATTGACCCCAACAGTGAAGCCTCGAAGGCACATGCAAAGCACTTATTGGCATCTCACGATCTACTTCTGCAAAGTACCTTAGAGACTGGAAGCTACAATAAACTCCACAGTTACAAACACATTATCAATGGCTTTTCTGTCCACACAACCCCTTCCCAGGCCGCGAGACTAAGAGGTCGTCCCGGAGTTAAGTTGGTAGAGAAAGACAAAGGAGCGAAAATGACGACAACATACACACCTGAGTTTCTTAGTTTACCAAACGGAATATGGGCGCAAGAAGGAGGTGACAGAAACGCTGGTGACGGAGTTGTTATTGGTTTAGTGGATAGTGGCATCAACCCATTTCATCCCAGCTTTGCTTACGATCCCATGCACCCTTTCACTTCCAATCTCTCTCGTTTTGAGGGTGCCTGTCAGACTGGTCCTCTCTTCCCACCATGTTCTTGCAATGGAAAGATAGTATCAGCGAGATACTTCTCCGCTGGGGCTGAAGCTACCGTTACCCTTAATGCTTCAAAGGACTTTCTTTCACCGTTTGATGCAGATGGACATGGCAGTCATGTGGCATCTATTGCTGCCGGCAATGCTGATGTTCCTGTCGTGGTGAATGGGTTTCTCTATGGGCAAGCTAGCGGAATTGCACCACGTGCAAGGATTGCGGTATATAAGGCTGTCTATCCCTCCGGGGGAACTCTGGCAGACGTTATTGCAGCTATCGATCACGCTGTCTTGGATGGGGTGAATATCTTATCGCTCTCTGTTGGACCAAATGAACCAGCGGAAGACAGGTTGACCTTCTTGAACATGTTTGATATTTCTTTGTTATTTGCACGAAAAGCGGGAGTTTTCGTGGTGCAAGCTGCAGGTAACAAGGGTCCAGCTTCTTCAAGTGTAGTGTCATTCAGTCCCTGGAGTGTGGGTGTAGCCGCTAGCACCACAGACAGAAAGTACCCTGCTTCACTTCTTCTTAGAAATGGCTCAATACTCAGTGGAGTGGGACTATCAGGTCCAACTTTTGGAAATGGATCAGTTTTCCATAAGCTTGTTTTAGCTAAAGATGCGGTAAAAATAAATGGAACAAACCCAATGACTCCGGAGTACATAGAGGAGTGCCAACATCCAGAAGCTTTGGACCCTAATATAGTGCTGGGAAGTATCATTATCTGCAACTTCTCAACTGGCTTCTATAATGGAACCTCAACTCTTGCTGCTATTATTGGCACCTCAAAGGCTCTAAGAACAGAGGGTTTTATTCTTGTTGCGAACCCAAGCTATGGTGATTATATTGCAGAGCCAATCCCTTTTGCTGTTTCTGGTATTTTGATCCCTCATGTAGATGATACCAAGGTTATATTACAGTATTATGAAGAACAAACAAAGAGGGATAATAAAGGAACTGCCACAGAATTTGGTGCTATGGCAGCTGTGGGAGAAGGAAGAGTTGCCACTTTCACAGGGAGATCACCTGTAGTTAGTAGATTTTCTTCAAGGGGTCCAGATATCATTGACATCAACAAAAATCCTGCAGATGTGCTTAAACCTGATGTTCTTGCTCCAGGGCACCAGATATGGGCAGCCTGGAGCCCTGTTAGTGCCTCAGAACCTATGCTGAAAGGGCACAATTTTGCATTATTATCTGGTACCAGCATGTCCACACCTCATGTGGCTGGAATAGCAGCACTTATCAAGCAATACAATCCATTATGGACTCCATCTATGATAGCATCTGCAATCTCCACAACAAGCTCAAATTATGATAATCTTGGGGACCATATGATGGCTGAAGGCTTTGAGGCCAACAGCTTGCTTCCCTCCACTCCTTTTGATTATGGGGCAGGCTTTGTGAGCCCCAATTGTGCCATTGATCCAGGTTTGGTACTATCATCAGAACATGAAGACTTCATCAGCTTTTTGTGCTCTTTGCCAAACATAGACACGGATGTAATAATCACAGCTACTGGAGAGCAATGCAATCACCCATTTGACTATCCATTCAGTCTAAACCTTCCTTCAGTAACAATATCTGCCCTAAGAGGATCAGTTTCTGTGCGAAGAACTTTCATGAGTGTAGGGAGCAAGACAGAGACGTACTTGGGCTCTGTTATACCTCCAAATGGAATTATAGTCGACCTGCACCCAACTTGGTTTACCATAAGTCCACAAGGATCACAAGATCTGGAAATACAACTCAGTGTCATCCAACCAATGAAGAATTATAGCTTTGGTGAAATTGTTTTGACAGGAAATTTGAGCCACATTGTACGAATAACATTGTCAGTCTTGCCAGTTTCAATGTAA 2463 0.443 MAKRSVASIALSSLSIFISMFFVAITQEDRSIYLVLLEGDALAFHEGSRDQHSSTIDPNSEASKAHAKHLLASHDLLLQSTLETGSYNKLHSYKHIINGFSVHTTPSQAARLRGRPGVKLVEKDKGAKMTTTYTPEFLSLPNGIWAQEGGDRNAGDGVVIGLVDSGINPFHPSFAYDPMHPFTSNLSRFEGACQTGPLFPPCSCNGKIVSARYFSAGAEATVTLNASKDFLSPFDADGHGSHVASIAAGNADVPVVVNGFLYGQASGIAPRARIAVYKAVYPSGGTLADVIAAIDHAVLDGVNILSLSVGPNEPAEDRLTFLNMFDISLLFARKAGVFVVQAAGNKGPASSSVVSFSPWSVGVAASTTDRKYPASLLLRNGSILSGVGLSGPTFGNGSVFHKLVLAKDAVKINGTNPMTPEYIEECQHPEALDPNIVLGSIIICNFSTGFYNGTSTLAAIIGTSKALRTEGFILVANPSYGDYIAEPIPFAVSGILIPHVDDTKVILQYYEEQTKRDNKGTATEFGAMAAVGEGRVATFTGRSPVVSRFSSRGPDIIDINKNPADVLKPDVLAPGHQIWAAWSPVSASEPMLKGHNFALLSGTSMSTPHVAGIAALIKQYNPLWTPSMIASAISTTSSNYDNLGDHMMAEGFEANSLLPSTPFDYGAGFVSPNCAIDPGLVLSSEHEDFISFLCSLPNIDTDVIITATGEQCNHPFDYPFSLNLPSVTISALRGSVSVRRTFMSVGSKTETYLGSVIPPNGIIVDLHPTWFTISPQGSQDLEIQLSVIQPMKNYSFGEIVLTGNLSHIVRITLSVLPVSM 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02943 820 SUPERFAMILY Protease propeptides/inhibitors 81 125 - -
Cca11g02943 820 CDD PA_subtilisin_like 380 510 - -
Cca11g02943 820 ProSitePatterns Serine proteases, subtilase family, histidine active site. 239 249 IPR022398 -
Cca11g02943 820 Pfam Peptidase inhibitor I9 62 125 IPR010259 -
Cca11g02943 820 Gene3D - 369 539 - -
Cca11g02943 820 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 51 810 IPR045051 -
Cca11g02943 820 ProSiteProfiles Serine proteases, subtilase domain profile. 135 676 - -
Cca11g02943 820 PRINTS Subtilisin serine protease family (S8) signature 155 174 IPR015500 -
Cca11g02943 820 PRINTS Subtilisin serine protease family (S8) signature 235 248 IPR015500 -
Cca11g02943 820 PRINTS Subtilisin serine protease family (S8) signature 601 617 IPR015500 -
Cca11g02943 820 ProSitePatterns Serine proteases, subtilase family, serine active site. 602 612 IPR023828 -
Cca11g02943 820 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 129 IPR037045 -
Cca11g02943 820 Gene3D Peptidase S8/S53 domain 157 689 IPR036852 GO:0004252|GO:0006508
Cca11g02943 820 Gene3D - 693 816 - -
Cca11g02943 820 Pfam Fibronectin type-III domain 722 815 IPR041469 -
Cca11g02943 820 Pfam Subtilase family 155 646 IPR000209 GO:0006508|GO:0008236
Cca11g02943 820 PANTHER SUBTILISIN-LIKE PROTEASE SBT2.6 51 810 - -
Cca11g02943 820 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 160 171 IPR023827 -
Cca11g02943 820 SUPERFAMILY Subtilisin-like 129 680 IPR036852 GO:0004252|GO:0006508
Cca11g02943 820 CDD Peptidases_S8_3 128 638 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02943 Cca-Chr11 56737947 56743022 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02943 32 815 Subtilisin-like Serine Gene Family AT1G62340 60.430 0.0 956
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02943 - - gmx:100798915 1369.37