Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02922 ATGGCTGACTTGTTGGAATGGGCAAAGAAAGATAATCGCCGCCTGCTTCATGTGGTCTACCGTGTTGGTGACCTTGACCGCACCATCAAGTTTTACACAGAATGTTTTGGGATGAAGCTTTTGAGGCAAAGAGATATTCCGGAGGAGAAATATGCCAATGCTTTTCTTGGATTTGGCCCAGAAGAAACCCATTTTGTTGTGGAATTAACATATAATTATGGGGTGACCTCGTATGACATTGGAGATGGCTTTGGACATTTTGCAATTGCAACTCAAGATATTTACAAATTGGTTGAACACATCCGAGCCAAGGGTGGAAACATCACTAGGGAGCCTGGTCCAGTTCAGGGTGGGACTACTGTTATCGCCTTTGTGAAGGATCCTGATGGTTACACTTTTGGACTCATCCAAAGACCTACAGTCAATGACCCATTTTGTCAACTAATGCTCCGTGTTGGTGATTTAGAGCGCTCAATTACCTTTTATGAAAAGGCTCTGGGCATGAAGTTGGTGAGGAAGGTTGATAAACCTGAGTACAAGTACACTATAGCCATGCTCGGGTATGGAGAGGAGCACGAGACAACTGTGTTGGAGTTGACATATAATTATGGTGTCACTGAATACTCTAAGGGAAATGCTTATGCACAGATTGCTGTTGGTACTGATGATGTATACAAGAGTGCTGAGGTGGTTGACCAAGTCATACAAGAGGTTGGAGGAAAGATTACTCGCCAACCAGGGCCAATTCCTGGCCTTAATACAAAAATCACTGCGTTTTTAGATCCTGATGGATGGAAAACTGTCTTGGTTGACAATGTTGATTTCTTGAAGGAACTGAAGTGA 843 0.433 MADLLEWAKKDNRRLLHVVYRVGDLDRTIKFYTECFGMKLLRQRDIPEEKYANAFLGFGPEETHFVVELTYNYGVTSYDIGDGFGHFAIATQDIYKLVEHIRAKGGNITREPGPVQGGTTVIAFVKDPDGYTFGLIQRPTVNDPFCQLMLRVGDLERSITFYEKALGMKLVRKVDKPEYKYTIAMLGYGEEHETTVLELTYNYGVTEYSKGNAYAQIAVGTDDVYKSAEVVDQVIQEVGGKITRQPGPIPGLNTKITAFLDPDGWKTVLVDNVDFLKELK 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02922 280 TIGRFAM glyox_I: lactoylglutathione lyase 3 146 IPR004361 GO:0004462|GO:0046872
Cca11g02922 280 TIGRFAM glyox_I: lactoylglutathione lyase 145 273 IPR004361 GO:0004462|GO:0046872
Cca11g02922 280 Gene3D - 1 140 IPR029068 -
Cca11g02922 280 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 145 272 IPR029068 -
Cca11g02922 280 PANTHER LACTOYLGLUTATHIONE LYASE-LIKE PROTEIN 4 280 - -
Cca11g02922 280 PANTHER LACTOYLGLUTATHIONE LYASE 4 280 - -
Cca11g02922 280 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 15 133 IPR004360 -
Cca11g02922 280 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 148 266 IPR004360 -
Cca11g02922 280 CDD GlxI_Ni 15 136 - -
Cca11g02922 280 Gene3D - 141 280 IPR029068 -
Cca11g02922 280 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 144 272 IPR037523 -
Cca11g02922 280 ProSitePatterns Glyoxalase I signature 1. 17 38 IPR018146 GO:0004462|GO:0046872
Cca11g02922 280 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 14 138 IPR037523 -
Cca11g02922 280 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 13 140 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02922 Cca-Chr11 56533533 56536718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02922 147 271 Calmodulin-binding Proteins AT1G08110 30.000 2.24e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02922 K01759 - gmx:100793089 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02922 11 56533533 56536718 Cca08g02088 08 53869901 53874440 PCT