Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02910 ATGGGTCTCAAGGGTTTCATCTTTTTTGCTATCTTATCCTTTTCAGCTCTGTCCCAGCTGAGTCCTTCTTTTGCTGAGGAAGAGCAAGGTAATGGCCTTGTTATGAACTTCTACAAGGAAACATGCCCTCAGGCTGAAGACATCATTCAAGAACAAGTCAAGCTTCTCTACAAGCGCCACAAGAACACTGCTTTCTCCTGGCTCAGGAACATCTTCCATGACTGTGCTGTTCAGAGTTGTGATGCCTCACTGTTGCTGGACTCCACAAGAAGGAGCTTGTCTGAGAAGGAGACAGACAGAAGCTTTGGGTTGAGGAATTTCAGGTACATTGAGACCATCAAAGAAGCTGTAGAAAGGGAATGCCCAGGAGTTGTTTCCTGTGCTGATATCCTTGTTCTCTCTGCCAGAGATGGCATTGTTTCGCTTGGAGGTCCTTATATCCCTCTTAAAACTGGAAGAAGGGATGGTAGAAGGAGCAGAGCTGATGTGGTTGAGCAATTCCTCCCAGACCACAATGAGTCCATTTCTGCAGTGCTTGACAAGTTTGGTGCCATGGGAATTAACACCCCCGGCGTGGTTGCATTGCTTGGAGCACACAGTGTTGGTCGAACCCACTGTGTGAAGTTGGTGCACCGTTTGTACCCAGAGGTTGATCCAGCGCTGAACCCTGACCATGTCCCTCACATGCTGAAGAAGTGCCCCGATTCCATTCCAGACCCCAAGGCCGTGCAGTACGTGAGAAACGACCGTGGCACCCCTATGATTCTAGACAACAACTATTACAGGAACATTTTGGACAACAAGGGCTTGTTGATAGTAGATCACCAACTAGCCAATGACAAGAGGACCAAGCCTTATGTGAAGAAAATGGCCAAGAGCCAGGACTATTTCTTCAAGGAGTTCTCTAGAGCCATCACCTTGCTCTCTGAAAACAACCCTCTCACTGGCACAAAGGGTGAGATCAGAAAGCAGTGCAATCTTGCCAACAAGCACCATGAGGACCCTTAA 1008 0.4802 MGLKGFIFFAILSFSALSQLSPSFAEEEQGNGLVMNFYKETCPQAEDIIQEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRRSLSEKETDRSFGLRNFRYIETIKEAVERECPGVVSCADILVLSARDGIVSLGGPYIPLKTGRRDGRRSRADVVEQFLPDHNESISAVLDKFGAMGINTPGVVALLGAHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLKKCPDSIPDPKAVQYVRNDRGTPMILDNNYYRNILDNKGLLIVDHQLANDKRTKPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKQCNLANKHHEDP 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02910 335 CDD secretory_peroxidase 32 326 IPR033905 GO:0004601|GO:0042744
Cca11g02910 335 ProSiteProfiles Plant heme peroxidase family profile. 32 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g02910 335 Pfam Peroxidase 50 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g02910 335 Gene3D Peroxidase, domain 2 169 308 - -
Cca11g02910 335 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g02910 335 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g02910 335 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g02910 335 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g02910 335 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g02910 335 Gene3D - 36 329 - -
Cca11g02910 335 SUPERFAMILY Heme-dependent peroxidases 33 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca11g02910 335 PANTHER PEROXIDASE 42 21 328 - -
Cca11g02910 335 PANTHER PEROXIDASE 25-RELATED 21 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g02910 335 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g02910 335 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g02910 335 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g02910 335 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g02910 335 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g02910 335 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g02910 335 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g02910 335 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g02910 335 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02910 Cca-Chr11 56427025 56429486 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02910 1 332 Peroxidase AT4G21960 81.325 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02910 K00430 - gmx:547513 620.928