Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02894 ATGCAGCTAATAACAGACCTCATTCTCCTGGCTCTGGCCTTCCTCTTCCTCCGCTGCTGGTGGCGCTACTGCTCCACCACCGGCGCAGGGCCCAAGAACCTCCCGCCAGGCCCGCCGGGGTGGCCCGTCGTCGGGAACCTCTTCCAAGTCATCCTGCAGCGCCGCCACTTCATCTACGTGGTCCGCGATTTACGTAAAAAGTACGGCCCCATCTTCAGCATGCAGATGGGCCAGCGCACGTTGATCATCGTGACCAGCGCGGACCTGATCCACGAGGCCCTAATCCAGCGAGGCCCGCAGTTCGCGAGCCGGCCCAAAGACTCCCCCATCCGGCTCCTCTTCAGCATGGGGAAGTGCGCCATCAACTCCGCGGAGTACGGCCCGCTGTGGCGCACTCTGAGGAGAAACTTTGTGAGCGAGATGATCAGCCCGCTGCGGATAAAGCAGTGCGGGTGGATACGAAAATGGGCCATGGAGGCCCACATGAGGAGGATCCAGAAGGAGGCCCGGGAGTTGGGCTTGGTGGAGGTGATGAGCAACTGCAGACTCACCATCTGCAGCATCCTCATCTGCCTCTGCTTCGGCGCCAAGATCGAGGAGAACCGAATCAAAAGCATAGAGAGCATTCTGAAAGACGTCATGCTCATCACGCTTCCCAAGCTTCCAGACTTCTTGCCCGTTTTCACGCCCTTGTTCCGCCGCCAGGTCAAGGAAGCCAAGGACCTCAGGAAGAGACAGGTTGAGCTCTTGGCGCCGTTGATTCGCAACCGCAAGGCTTACGTCCAGGGCAAGTTCGAGGGTGCTCACATGGCCAGTCCTGTTGGCGCTGCTTACGTGGACTCCTTGTTCGGCTTGGAGGTTCCCGGTCGTGGACGCTTGGGGGAGGAGGAGCTTGTCACGCTGGTCTCCGAGGTTATCAGCGCCGGGACGGACACCAGCGCCACCGCGCTCGAATGGGCGCTGCTTCATTTAGTTATGGACCAGGAGATTCAGGAGAGATTGTATAGAGAGATTGTGGAGTGTGTGGGGAAGGACGGTGTGGTTACGGAGAGTGACGTGGAGAAGATGCCTTACCTGAGCGCCGTCGTCAAGGAGACTTTCCGGCGCCACCCGCCCAGCCACTTTGTCTTGTCGCACGCCGCCACCGAGGAGACCAAGCTCGGCGGGTATACCATCCCGAAGGAGGCGAGTGTGGAGTTTTACACGGCGTGGTTGACGGAGGATCCGAATATGTGGAAGGATCCGAATGAGTTCCGACCCGAGAGGTTTTTAACCGGGGATGGGGTTGACGTGGACGTGACGGGGACGAAAGGGGTGAAGATGATGCCGTTCGGCATCGGAAGGAGGATTTGTCCAGCTTGGAGTCTTGGCATTCTGCACATAAACTTGTTGCTGGCTAAAATGGTGCATGCTTTTCACTGGTTGCCCATACCCAATAACCCCCCCGACCCCACTGAGACTTTCGCTTTCACTGTTGTCATGAAGAACCCTCTCAAGGCTGTTATTGTGCCCAGATCCATTTACTGA 1527 0.5815 MQLITDLILLALAFLFLRCWWRYCSTTGAGPKNLPPGPPGWPVVGNLFQVILQRRHFIYVVRDLRKKYGPIFSMQMGQRTLIIVTSADLIHEALIQRGPQFASRPKDSPIRLLFSMGKCAINSAEYGPLWRTLRRNFVSEMISPLRIKQCGWIRKWAMEAHMRRIQKEARELGLVEVMSNCRLTICSILICLCFGAKIEENRIKSIESILKDVMLITLPKLPDFLPVFTPLFRRQVKEAKDLRKRQVELLAPLIRNRKAYVQGKFEGAHMASPVGAAYVDSLFGLEVPGRGRLGEEELVTLVSEVISAGTDTSATALEWALLHLVMDQEIQERLYREIVECVGKDGVVTESDVEKMPYLSAVVKETFRRHPPSHFVLSHAATEETKLGGYTIPKEASVEFYTAWLTEDPNMWKDPNEFRPERFLTGDGVDVDVTGTKGVKMMPFGIGRRICPAWSLGILHINLLLAKMVHAFHWLPIPNNPPDPTETFAFTVVMKNPLKAVIVPRSIY 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02894 508 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 504 - -
Cca11g02894 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Cca11g02894 508 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02894 508 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02894 508 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02894 508 Pfam Cytochrome P450 35 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02894 508 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02894 508 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02894 508 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02894 508 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02894 508 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02894 508 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02894 508 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02894 508 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02894 508 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02894 508 SUPERFAMILY Cytochrome P450 35 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g02894 508 PANTHER CYTOCHROME P450 LIKE PROTEIN 4 504 - -
Cca11g02894 508 Gene3D Cytochrome P450 30 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02894 Cca-Chr11 56284834 56286764 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02894 4 506 Cytochrome P450 AT1G11600 68.898 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02894 K21995 - gmx:100787281 889.797