Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca11g02891 | ATGATGTCCTTAGTGAAGTACACAGCATTACCTGCTTCCTCAAGTCATGTTCCAAGGCCTCAGCTCTTCACATTACCCTCTATTCACAATGTTCAACAAAGCACTGAATCCCATTTCTCTTCCCTCAGACCTCTTTACATTTCATCCACTCACAACTTCACATTGTCACCAATACTCAGAAGGAGGGTTACTGAGTGCCAGGCCTATGAAGCAGATAGGTCACAGCCTCTAAAGATTAACATTGATGAAGAGACAGGGATTGAGGCAGCTCAGAGGCTCAAAATTGGTTTGTATTTTGCTACTTGGTGGGCTCTCAATGTGGTCTTCAACATATACAACAAGAAGGTTCTCAATGCTTTTCCTTACCCCTGGCTTACTTCCACTTTGTCCCTTGCTGCTGGCTCTCTCATTATGCTAATCTCATGGGCCACAAGGGTTGCTGATGTCCCAAAAGTTGATTTCGAGTTCTGGAAGGCCCTCTTTCCTGTTGCGGTGGCACACACAATTGGGCATGTTGCAGCCACGGTGAGTATGTCCAAAGTCGCTGTTTCATTTACTCACATCATCAAGAGTGGAGAGCCTGCATTCAGTGTCCTCGTATCAAGATTCTTGCTAGGGGAAGCATTCCCTTTGCAGGTTTACCTGTCACTTGTGCCAATTATAGGAGGTTGTGCACTTGCTGCTGTGACGGAGCTCAATTTCAATATGATTGGGTTTATGGGGGCTATGATATCCAATTTGGCCTTTGTGTTTCGGAATATATTCTCAAAGAAGGGAATGAAAGGGATGTCTGTTAGTGGAATGAACTACTATGCTTGTCTTTCCATATTGTCCCTACTGATTCTCACACCTTTTGCCATTGCTGTGGAGGGCCCAAAGATGTGGGCTGCTGGCTGGCAAACAGCCTTGTCTCAGATTGGTCCCAATTTTGTCTGGTGGGTAGCTGCTCAGAGTGTCTTCTACCACTTGTACAATCAAGTCTCTTACATGTCTCTTGATCAGATTTCTCCCTTAACATTTAGCATAGGGAACACAATGAAGAGAATTTCAGTAATTGTCTCCTCCATCGTTATCTTCCACACACCAATTCAGCCCGTCAATGCCCTTGGGGCAGCCATTGCAATTCTTGGCACCTTCCTCTATTCACAGGTACGTGGTGACAATGCAATGTGGTTTTGTGCATGTCACAAAAAATTTGTGAATATGGTGATAGTCTTGTTTCTCTTCATATCCTCTCTGACAGCAATCTCACATGGATTAGATGAAACTCCATCTTTCCCCAACTACTTTCTCTTTGGCACTGCTTCTTCTTCGTACCAGTATGAAGGAGCTTACTTGAGTGACGGCAAAGGGATGAGCAACTGGGATGTCTTCACTCACAAACCAGGTAGTATAGATGATGGAAGTAATGGTGATGTTGCTGTTGATCAATACCATCGCTATCTGGAGGATATTGATCTAATGAAAGCTATAAAAGTCAACAGCTACCGGTTTTCAATATCATGGGCAAGAATTCTACCAGAAGGTAGATTTGGAGAAGTCAACTTGGCGGGTATCAACTACTATAACAAACTTATAAATGCGTTGCTACTCAAAGGTATCCAACCGTTTGTAACATTATTTCACTTTGACATCCCTCAAGAGCTTGAAGACAGATACGGAGCTTGGTTAAGTCCCCAATCACAGGAAGATTTTAAATTCTTTGCGGATATCTGTTTTAAATACTTGGGTGACAGAGTCAAGTATTGGGTCACCTTCAATGAGCCAAATTATATAGTCCCACTTGCCTATCGTATAGGTATATTCCCACCATGCCGTTGCTCTAGCAAATTTGGAGATTGCAATGAGGGAGATTCAGAGAAAGAACCTTTTGTGGCAGCCCATAATATGATCCTATCACATGCAGCTGTAGTTGATATGTATAGAAACAAATACCAGACTGAGCAAGGGGGGAAAATAGGCATTGTCCTACACTGTGACTGGTTTGAGCCGTTAAGCAATTCCACAGAAGATAAATTGGCCACTGAAAGAGCACAATCATTCAACATTAAATGGATATTGGATCCAATCTTGTTCGGTAAGTACCCAAAAGAGATGGAGATGATTCTAGGAACCATCTTACCTAAATTTTCCAGCAATGACAAAGCTAAATTGAGGAGAGGACTGGATTTCATTGGCATAAACCACTATGCAAGTTACTATGTCCGAGACTGCATATCAACCGTGTGTGAATCTGGGCAAGGAGTCACCAGAACAGAGGGTTTATATCAACAAACTTCACTAAAAAACGGTGTCCCAATTGGAGAGCTTACTCCATGTGATTGGCTCAACGTTTATCCACAAGGCATGAAGAAAATTCTTATCTATCTAAAAGACAGATATAATAACACTCCAATGTTCATCACCGAAAATGGATATGGCAATTTGAATGATCCAGATCTTACCGAGGAAGAATATCTTAATGATTTTAAGAGAATAGAGTACATGTCTGGTCACTTAGATAACCTAATGGCAGCAATAAGGGAAGGAGCAGATGTGAGAGGTTACTTtgcctggtccttgctcgacaactttgagtggaaatttgggttttcattgagatttggacttcaccacgttgatttCGCCACACTGAAGAAAACCCCAAAATCCTCAGCAAGTTGGTACAAACATTTCATTGAAAAGTATACAACCGAGAGCATTGTGGCCGAACAAACAATAGAAGGCAAATACCAAGCTTAG | 2742 | 0.4103 | MMSLVKYTALPASSSHVPRPQLFTLPSIHNVQQSTESHFSSLRPLYISSTHNFTLSPILRRRVTECQAYEADRSQPLKINIDEETGIEAAQRLKIGLYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLAAGSLIMLISWATRVADVPKVDFEFWKALFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEAFPLQVYLSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGMSVSGMNYYACLSILSLLILTPFAIAVEGPKMWAAGWQTALSQIGPNFVWWVAAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIVIFHTPIQPVNALGAAIAILGTFLYSQVRGDNAMWFCACHKKFVNMVIVLFLFISSLTAISHGLDETPSFPNYFLFGTASSSYQYEGAYLSDGKGMSNWDVFTHKPGSIDDGSNGDVAVDQYHRYLEDIDLMKAIKVNSYRFSISWARILPEGRFGEVNLAGINYYNKLINALLLKGIQPFVTLFHFDIPQELEDRYGAWLSPQSQEDFKFFADICFKYLGDRVKYWVTFNEPNYIVPLAYRIGIFPPCRCSSKFGDCNEGDSEKEPFVAAHNMILSHAAVVDMYRNKYQTEQGGKIGIVLHCDWFEPLSNSTEDKLATERAQSFNIKWILDPILFGKYPKEMEMILGTILPKFSSNDKAKLRRGLDFIGINHYASYYVRDCISTVCESGQGVTRTEGLYQQTSLKNGVPIGELTPCDWLNVYPQGMKKILIYLKDRYNNTPMFITENGYGNLNDPDLTEEEYLNDFKRIEYMSGHLDNLMAAIREGADVRGYFAWSLLDNFEWKFGFSLRFGLHHVDFATLKKTPKSSASWYKHFIEKYTTESIVAEQTIEGKYQA | 913 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca11g02891 | 913 | ProSitePatterns | Glycosyl hydrolases family 1 N-terminal signature. | 430 | 444 | IPR033132 | - | |
Cca11g02891 | 913 | Pfam | Glycosyl hydrolase family 1 | 425 | 895 | IPR001360 | GO:0004553|GO:0005975 | |
Cca11g02891 | 913 | TIGRFAM | tpt: Tpt phosphate/phosphoenolpyruvate translocator | 93 | 385 | IPR004696 | GO:0016021|GO:0022857|GO:0055085 | |
Cca11g02891 | 913 | PRINTS | Glycosyl hydrolase family 1 signature | 721 | 735 | IPR001360 | GO:0004553|GO:0005975 | |
Cca11g02891 | 913 | PRINTS | Glycosyl hydrolase family 1 signature | 867 | 879 | IPR001360 | GO:0004553|GO:0005975 | |
Cca11g02891 | 913 | PRINTS | Glycosyl hydrolase family 1 signature | 822 | 833 | IPR001360 | GO:0004553|GO:0005975 | |
Cca11g02891 | 913 | PRINTS | Glycosyl hydrolase family 1 signature | 799 | 807 | IPR001360 | GO:0004553|GO:0005975 | |
Cca11g02891 | 913 | PRINTS | Glycosyl hydrolase family 1 signature | 843 | 860 | IPR001360 | GO:0004553|GO:0005975 | |
Cca11g02891 | 913 | Pfam | Triose-phosphate Transporter family | 93 | 382 | IPR004853 | - | |
Cca11g02891 | 913 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 135 | 229 | - | - | |
Cca11g02891 | 913 | PANTHER | GLYCOSYL HYDROLASE | 400 | 897 | IPR001360 | GO:0004553|GO:0005975 | |
Cca11g02891 | 913 | PANTHER | BETA-GLUCOSIDASE 45 | 400 | 897 | - | - | |
Cca11g02891 | 913 | Gene3D | Glycosidases | 412 | 904 | - | - | |
Cca11g02891 | 913 | SUPERFAMILY | (Trans)glycosidases | 424 | 894 | IPR017853 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca11g02891 | Cca-Chr11 | 56256957 | 56265066 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca11g02891 | 390 | 893 | Glycoside Hydrolase | AT4G21760 | 55.754 | 0.0 | 617 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca11g02891 | K05350 | - | cit:102607393 | 1273.84 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca11g02891 | 11 | 56256957 | 56265066 | Cca08g02119 | 08 | 54291752 | 54295026 | PCT |