Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02822 ATGTCTGGGTCTTTGATGGACTGCAATAAAGAAGAGGCCTTAAGGGCCAAGGACATTGCTGAAAAGAAGATGGAAAACAAGGATTTTGTGGGGGCTCGTAAAATTGCTCTAAAAGCTCAGCAGCTATACCCTGATCTGGAAAATATAGCTCAAATGCTTGTTGTCGAACAGACAGCTGGTGATGCAATGATTAAGAAGCAATATAGGAAGTTTGCTCTCCAACTTCATCCTGACAAAAACAAGTTTGCTGGAGCAGAAGCTGCATTTAAGCTGATTGGGGAAGCTCAAAGAGTGCTTCTGGACAGAGAGAAACGATCCCTTTTTGACATGAAGCGCAGAGTTCCAATGAACAAACCTGCTATGTCACGTTTTAGTTCTACAGTGAGGAGCAATGTTAGGCCCAACTTTACAAGATCAAATGCTCAACAGCAGCAGTCTAGGCAGCCAGTGCCGCAGCAGCAAAATGGTGTCCGCCCTACATTTTGGACAGTCTGCCCATTTTGTTCTGTTAAGTATCAATATTACAAAGAAATTTTAAATAAATCTCTTCGTTGTCAAAATTGCAGTAGACCCTTTGTTGCATACGAAGTGGTTATAAAAGGTACATCATCGCCAGCAACTAATTCAACACAGCAAGCTTCTGACCAGCGAAAAGATGGTTTAAATCATGGTGCCTTCAAGGCAGGTGCTGGATCTCAAGGCAATTCACATGCTGAGAAGTCCAATACTGGACCATATGATAAAAAAGGACCTACTAATGTCTCTGGAAAGCACAATGGAAAGAGAAAGAGGAAGCAGGTGGCAGAATCCAGTGAAAGCTTTGATTGTATAAGCAGTAGCGATTCTGAAGGAGATGCAGCTGCCAGCAAGGGTGGTTTTTCTGGTGTAGAAAATAGCTCAACCTTTAGAGAACGGCATCCGCGCAGATCTACAAGGCAAAATCATGGAGTTTCCTACAAGGAGAACAGAAGTGATAATGATGATGGCTTGGTGAAACCTTCAAAAAGGGGTCTGGAGAGCAGATCACTGCATGGTGATGGTAAAAGTCATGGTGAGACAATCAAAATGAATAATCAGAATGGTTTAGCTGGTGATATAAAAGATGGACATAAAGAGGTAAAACAGAAACAACATTTGTATTCTGAAGAGAGCTTGCGCAATAGAAAGGAAGAACTTAAGACAGATGCAGTGGGAGGGTCAAAGCAGATGGATGAAACTTCAGAGCGTTCTGGTCCAGCTTCAATCTCCAAAGTAACAAACCATCCAAATGTTTATGTCTTTCCTGATGCGGAGTTCAGTGACTTCGAAACAGACAAGAAGAAAGAATGTTTTGCTACTGGGCAGATTTGGGCTGTTTATGATACAACAGATGGCATGCCCAGATTCTATGCTTTAATCAGAAAAGTTCTGTCTCCTGAATTCAAGCTGCAGATAACATGGTTTGAATCACATCCAGATTGCAAGGATGAAATAAAATGGGTAAATGAGGATTTGCCTGTTGCTTGTGGGAAATTCAAAGTTGGTGACACTGACATCACTGAAGATCATTTGATGTTCTCTCATCTGGTTTTGTGTGAAAAGATTGGCCGTAATACTTTTAAAGTGTATCCTAGAAAGGGAGAAACTTGGGCCCTTTTTAAAAATTGGGATATCAAATGGTACATGGATGTGGAATCTCATCAGCAGTATGAATATGAGTTTGTTGAAATCTTGACAGATTATGTTGAAGGTGAGGGTGTATATGTTGTGTACTTGGCTAAGTTGAAAGGTTTTGTAAGTCTTTTCTTTCGAAATATGAAGGAAGATAACAAATCATTTCAAATTCCAAAACAGGAATTATTCAGATTTTCTCACAAGGTTCCGTCTTTCAAAATGACTGGTGAGGAAGGAGTTGGTGTACCTACAGGATCTTATGAACTTGATCCTGCAGCTTTGCCAGTGAATCTTGAAGAGACTGCTGTTCCTGAAAATTTGGATGTGAAGGTTACTCATAGTTTATCTGGCGATGAGAATACAAGGTCTTCCAATAGGTCAGAACCCAAGGTTAATTTGGAAAGAAGCAATTTGGCAAGAGAGAACAAGGATTCTGTTGATGACAGTGATATTAGTTGTGCTCCTCCAGCATCAAGCTCAGAAGCTATTGAAATTCCAGATACTCAATTCTTCAATTTTGATGCTGGGAGGTCCCTTGAAAAGTTTCAAATTGGTCAGATTTGGGCGTTTTACAGTGATGAAGATGGATTGCCAAAGTATTATGGTCAGATTAATAAGATTAAGAGCAGCTCAGATCTTGAATTGCATGTTTCCTGGCTTACTTGCTGCTGGCTACCAGAGAATACCATTAAATGGGAAGACAAAGATATGCTTATTTCCTGTGGGAGGTTTAAAGTTAATAAAACAGATGAATTTCTCAGTGTTTATAGTACCACGTCTTCTGTTTCTCATCAAGTTCATGCTGATGTTGTTAAGAATAAGAGTTATGCCATCTTACCGAGGAAAGGTGAAGTTTGGGCGTTATATAGAAAATGGACACATAAAATCAAATGTTCTGAGTTGGAAAATTGGGAGTATGACATAGTGGAAGTTGTTGAAGAAAGTGATTTGTTCATAAATGTTTTAGTTCTGGAGTTTGTTAGTGGATTTAGTTCAGTTTTCAAAGGCAAATCAAATGAAGGGTCGTCCGTCAACCTAAGAATACCCAGGAAAGAGTTGCTCAGGTGCGCTACCAGTTCATTACTATGGCTTGAAATGAAAGGGGCTGAGCCGAAGGCCATGGTTTACTTGGCTAACCTTTTGGAAGGTTTTTCTGCATGTAGTAGTGGTAGGCTGCGAATCACTAACGGAGGAATTCCGTCATGGCACGTCTAA 2868 0.4027 MSGSLMDCNKEEALRAKDIAEKKMENKDFVGARKIALKAQQLYPDLENIAQMLVVEQTAGDAMIKKQYRKFALQLHPDKNKFAGAEAAFKLIGEAQRVLLDREKRSLFDMKRRVPMNKPAMSRFSSTVRSNVRPNFTRSNAQQQQSRQPVPQQQNGVRPTFWTVCPFCSVKYQYYKEILNKSLRCQNCSRPFVAYEVVIKGTSSPATNSTQQASDQRKDGLNHGAFKAGAGSQGNSHAEKSNTGPYDKKGPTNVSGKHNGKRKRKQVAESSESFDCISSSDSEGDAAASKGGFSGVENSSTFRERHPRRSTRQNHGVSYKENRSDNDDGLVKPSKRGLESRSLHGDGKSHGETIKMNNQNGLAGDIKDGHKEVKQKQHLYSEESLRNRKEELKTDAVGGSKQMDETSERSGPASISKVTNHPNVYVFPDAEFSDFETDKKKECFATGQIWAVYDTTDGMPRFYALIRKVLSPEFKLQITWFESHPDCKDEIKWVNEDLPVACGKFKVGDTDITEDHLMFSHLVLCEKIGRNTFKVYPRKGETWALFKNWDIKWYMDVESHQQYEYEFVEILTDYVEGEGVYVVYLAKLKGFVSLFFRNMKEDNKSFQIPKQELFRFSHKVPSFKMTGEEGVGVPTGSYELDPAALPVNLEETAVPENLDVKVTHSLSGDENTRSSNRSEPKVNLERSNLARENKDSVDDSDISCAPPASSSEAIEIPDTQFFNFDAGRSLEKFQIGQIWAFYSDEDGLPKYYGQINKIKSSSDLELHVSWLTCCWLPENTIKWEDKDMLISCGRFKVNKTDEFLSVYSTTSSVSHQVHADVVKNKSYAILPRKGEVWALYRKWTHKIKCSELENWEYDIVEVVEESDLFINVLVLEFVSGFSSVFKGKSNEGSSVNLRIPRKELLRCATSSLLWLEMKGAEPKAMVYLANLLEGFSACSSGRLRITNGGIPSWHV 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02822 955 MobiDBLite consensus disorder prediction 203 218 - -
Cca11g02822 955 MobiDBLite consensus disorder prediction 674 699 - -
Cca11g02822 955 Gene3D DnaJ domain 48 154 IPR036869 -
Cca11g02822 955 ProSiteProfiles dnaJ domain profile. 48 112 IPR001623 -
Cca11g02822 955 MobiDBLite consensus disorder prediction 400 418 - -
Cca11g02822 955 PANTHER - 4 908 - -
Cca11g02822 955 SUPERFAMILY Chaperone J-domain 43 114 IPR036869 -
Cca11g02822 955 PRINTS DnaJ domain signature 84 104 IPR001623 -
Cca11g02822 955 PRINTS DnaJ domain signature 50 68 IPR001623 -
Cca11g02822 955 PRINTS DnaJ domain signature 68 83 IPR001623 -
Cca11g02822 955 MobiDBLite consensus disorder prediction 271 285 - -
Cca11g02822 955 MobiDBLite consensus disorder prediction 365 398 - -
Cca11g02822 955 CDD DnaJ 55 101 IPR001623 -
Cca11g02822 955 SMART dnaj_3 47 104 IPR001623 -
Cca11g02822 955 Pfam DnaJ domain 52 109 IPR001623 -
Cca11g02822 955 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 4 908 - -
Cca11g02822 955 MobiDBLite consensus disorder prediction 203 418 - -
Cca11g02822 955 MobiDBLite consensus disorder prediction 234 249 - -
Cca11g02822 955 Pfam Domain of unknown function (DUF3444) 711 906 IPR024593 -
Cca11g02822 955 Pfam Domain of unknown function (DUF3444) 424 629 IPR024593 -
Cca11g02822 955 MobiDBLite consensus disorder prediction 662 710 - -
Cca11g02822 955 MobiDBLite consensus disorder prediction 314 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02822 Cca-Chr11 55647784 55651350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02822 9 197 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.193 5.07e-22 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02822 - - gmx:100795200 1425.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02822 11 55647784 55651350 Cca11g02822 11 55647784 55651350 ECH
Cca11g02822 11 55647784 55651350 Cca08g02200 08 55352429 55357602 PCT