Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02748 ATGAATTCCAACAACTTCAATTTCGATTTCGATCTCGGCATCGGATCCAACCGCCCCAAATCCCTAAACGATCAGAAAAACCCCAAACCTtcctattccacctattccaccaccaccacctcctcctcctcctattcctcAGCGCAACCCAGGAAACAGCCCTCATGGACCCACCAACCCCTCCCCACTCAGACCACCGCGCTCCCGGGTGGCTCCCCCTCCATGGTCGGAGACATCTTCGGCAAGAGTTGGGGAACCACTCAACCACCTTCTTCGGCTTCCACCATTGGGATCGTTAATAAGAACCCAAACCTCTTCGGAGATTTGGTAAGCTCTGCTTTGGGCCAGGGTTCTAAGACCTCTTCCACCAACGTTCCTCTCAAAAATGCTACTTCCAAGGTCTCATCAGCTCCCACCTCCAATAAAACCTCCTTTTCCATGGGAAACATGGCTGATTCTTTGCCCAAAACTGCTTCCACGCCACAAACCACCGCTAGTTGGGCATCTTCTGGGACTTTTAGTATGAACAATACCAATAAAACCCCCAATCTAGGGGGTCCTTCATTGCGTAGTACTGCAACAGGAACCAGTTCTGTTAACAACGATCCTTTTAGCTCATTGTCTGGTATTGGATCCAACCAATCTGCTTCTCTTAATTCATCTGCTAAGGGGCAAAAGGCTGCTTTAGGGGATGATGGTTTTGGAGATTTTAAAAGTGCTTCCACCGCGTTTCCATCAACTGCTTCCCCCGGAATTGATTTCAATTTTACTGGATCTGCTGCTTCCAATCAGACTCCTCCTGTTCAGGCATCAGGTGGTGGTGATCCAACGGACATGTTTTTCGCGCCGGCTTCGTCGGCCTCGggtggtggtggtggtggtgctgctgctgctgCGCCCTCTGATGGATTTGGAGGACAGGATGATTGGGGGTTGGATTCTGAGTTTGGTGGGGGAGGGCATGATGTGGGTGGTGCCACTACTGAGCTTGATGGGCTGCCTCCTCCTCCTGCTGGGGTATCAGGCTCCACTGCCAAAGGCAAGGGGATGGACAATTACAAGCAGGGACAGTTTGCTGATGCTATTAAGTGGTTTTCATGGGCCGTCATCCTTCTAGAGAAAGCTGGGGATAGTGCAGCCACATTCGAGGTTTTGTCGTGCCGGGCTTCGTGTTACAAGGAAGTTGGGGAGTATAAAAAGGCAGTGGCAGATTGTACAAAGGTTCTTGAAAATGATGAAACCAATGTGTCTGTCCTGGTACAGCGTGCTCTCTTGTACGAGAGTATGGAAAAGTACAGACTTGGTGCTGAAGACCTCAGAACTGTGCTGAAGATTGATCCTGGTAATAGGATTGCTAGAAGCACTGTTCACCGGCTGGCCAAGATGGCTGAATAG 1395 0.4703 MNSNNFNFDFDLGIGSNRPKSLNDQKNPKPSYSTYSTTTTSSSSYSSAQPRKQPSWTHQPLPTQTTALPGGSPSMVGDIFGKSWGTTQPPSSASTIGIVNKNPNLFGDLVSSALGQGSKTSSTNVPLKNATSKVSSAPTSNKTSFSMGNMADSLPKTASTPQTTASWASSGTFSMNNTNKTPNLGGPSLRSTATGTSSVNNDPFSSLSGIGSNQSASLNSSAKGQKAALGDDGFGDFKSASTAFPSTASPGIDFNFTGSAASNQTPPVQASGGGDPTDMFFAPASSASGGGGGGAAAAAPSDGFGGQDDWGLDSEFGGGGHDVGGATTELDGLPPPPAGVSGSTAKGKGMDNYKQGQFADAIKWFSWAVILLEKAGDSAATFEVLSCRASCYKEVGEYKKAVADCTKVLENDETNVSVLVQRALLYESMEKYRLGAEDLRTVLKIDPGNRIARSTVHRLAKMAE 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02748 464 MobiDBLite consensus disorder prediction 255 271 - -
Cca11g02748 464 PANTHER OS03G0340700 PROTEIN 7 464 - -
Cca11g02748 464 MobiDBLite consensus disorder prediction 18 71 - -
Cca11g02748 464 MobiDBLite consensus disorder prediction 255 321 - -
Cca11g02748 464 Gene3D Tetratricopeptide repeat domain 342 463 IPR011990 GO:0005515
Cca11g02748 464 SUPERFAMILY TPR-like 346 454 IPR011990 GO:0005515
Cca11g02748 464 SMART tpr_5 382 415 IPR019734 GO:0005515
Cca11g02748 464 SMART tpr_5 416 449 IPR019734 GO:0005515
Cca11g02748 464 SMART tpr_5 342 375 IPR019734 GO:0005515
Cca11g02748 464 MobiDBLite consensus disorder prediction 1 92 - -
Cca11g02748 464 MobiDBLite consensus disorder prediction 117 218 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02748 341 464 Calmodulin-binding Proteins AT3G25230 32.593 6.01e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02748 - - pvu:PHAVU_003G107800g 679.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02748 11 54856935 54861079 Cca11g02748 11 54856935 54861079 ECH