Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02745 ATGGTTCTTTTTCCATCTTTTGTGAATGGATTGGCGAGAACCGTGTCAATGAAAAAAGACAAGAATTGTCAAAAGGAAGATGGAAGGAAAGCTGTGGAAGAATTGGCAAAGGAAGCAAGGAAGAATGAATTGTTATTGAGTTCATCTGGAGTTATTAAGTCAACCAAGGCCAACAATTTTGTTTCTGTGTTCACCAGTAGGGGCCAAAAAGGAGTCAATCAGGATCGTATTCTTGTTTGGGAGGAATTTGGTTGCCAACAAGACACGATGTTCTGTGGAGTTTTTGATGGGCATGGCCCATGGGGACACTTTGTAGCCAAAAGGGTCAGAAAACTAGTACCAGCCTTTTTGCTACGCAACTGGCAAGAAAATCTGGCTGCAACATCACTTGACCTGGATTTTAAGATAGAAGCAGACAAGAATATGCATAGATTGGACATGTGGAAGCAATCCTACATAAAGACTTGTGTTGCTGTTGATCAGGATCTGAAGCAGCACACTGGGATTAATTCCTTCCTAAGTGGCACTACAGCTTTGACAATTATCAAACAGGGTGAATATCTTATTGTAGCAAACATGGGTGATTCTAGGGCTGTCTTGGCAACTACTTCAGACGATGGCACATCAATTCCACATCAGCTTACCACTGACTTCAAACCAAATTTACCACAGGAAGTAGAGCGCATAACACAATCTAAAGGGCAGGTCTTTTGTTTGGAAGATGAACCAGGAGTGTACAGGGTCTGGATGCCAAATGGTAAAACACCAGGACTAGCAATATCTAGAGCTTTTGGAGATCACTGCATGAAGGAATTTGGAGTAATCTCTGTGCCAGATGTGACCCATAGAAAAATTACCCCCAGTGATCAATTTGTAATCTTGGCAACAGATGGGGTGTGGGATGTTATATCTAATGAGGAAGCAGTGAAGATTGTTTCTGCAACACCGCATAAAGAAAAAGCAGCTCAAAGGCTCGTGAAATGTGCCATACATGAATGGAAACGCAAGAAAAGTGGCATTGCCATGGATGACATGTCAGCTATTTGTCTATTCTTTCACTCTTCCCCCACACATCGACCCCCAGCCATTAAAATTGTTGATTAA 1104 0.4203 MVLFPSFVNGLARTVSMKKDKNCQKEDGRKAVEELAKEARKNELLLSSSGVIKSTKANNFVSVFTSRGQKGVNQDRILVWEEFGCQQDTMFCGVFDGHGPWGHFVAKRVRKLVPAFLLRNWQENLAATSLDLDFKIEADKNMHRLDMWKQSYIKTCVAVDQDLKQHTGINSFLSGTTALTIIKQGEYLIVANMGDSRAVLATTSDDGTSIPHQLTTDFKPNLPQEVERITQSKGQVFCLEDEPGVYRVWMPNGKTPGLAISRAFGDHCMKEFGVISVPDVTHRKITPSDQFVILATDGVWDVISNEEAVKIVSATPHKEKAAQRLVKCAIHEWKRKKSGIAMDDMSAICLFFHSSPTHRPPAIKIVD 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02745 367 CDD PP2Cc 59 352 IPR001932 -
Cca11g02745 367 SUPERFAMILY PP2C-like 55 353 IPR036457 -
Cca11g02745 367 Pfam Protein phosphatase 2C 84 331 IPR001932 -
Cca11g02745 367 Gene3D - 47 354 IPR036457 -
Cca11g02745 367 PANTHER PROTEIN PHOSPHATASE 2C 41-RELATED 1 359 - -
Cca11g02745 367 SMART PP2C_4 51 350 IPR001932 -
Cca11g02745 367 PANTHER ALPHABET, ISOFORM E-RELATED 1 359 - -
Cca11g02745 367 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02745 Cca-Chr11 54830492 54834059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02745 1 353 PP2C-type Phosphatase Gene Family AT3G05640 58.310 2.69e-158 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02745 - - gmx:100817397 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02745 11 54830492 54834059 Cca11g02745 11 54830492 54834059 ECH