Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02738 ATGGCTTCAACGGACATCAGAGGCATTTTGACAGCTTTCAATCCTTCTCAAGACTTCTTCGCTATCACCGCTGGAGACGGTCGCGTCAAGATATGGGACACGCTCAGCGGTCAGGTCCAGACCGAGTTCGCGGATTTTGCGTCAACTCCTTCAACTACTTTACTCGATAAATCTGTTAACGGCCATCTTGCGCTGGATTATACTTGCATCAAGTGGTTATCCTTCGAAAGAAAGAGGAAAAGGAAGCATGCATCCTCATTGTTAGTGCTTGGAACTGGTAGTGGTGATGTTTTAGCACTTGACGTAGCTGCTGGTCAATTGAGTTGGAGAATTAATGATTGTCATCCAGGAGGTGTGAGAACCATTGCATCTTCTGCACACGGGTCAAGCATATATACTGCTGGTGCAGATGGGATGGTATGTGTCATAGATTTCATGACAGGAAACCTGTTGGAGAAATTTAAAGCTTCTACAAAGGCCGTGTCCTGCATGTGTGTTTCTCCAGATGGGAAGACGTTGGCTACTGCAGCAGCACAACTGAAGATTTTTAATTGTTCTAACCACAAAAAGATTCAAAAGTTCTCTGGTCATCCTGGATCCGTTCGATGCATGGTTTTCACTGAAGATGGCAAGTATATCCTCTCATCTGCTGTTGGTGAAAGATATGTTGCTGTTTGGAGGATAGATAGTGCAAAAAAGCAGTCAGCTAGTTGTGTTCTTGCGATGGAGCACCCTGCTGTCTTTCTTGATAGCAGGTGCATTGATAGTGGGGAGCATGATGAGGCTGGCATGTGTGTTTTGGCCATCACAGAAACTGGTGTTTGTTATTTATGGTTTGGAAATAGTATTGAAGAACTACGTAATGCAAAACCCACAAAAATATCATTATCTTTAGAAGACATGTCCTCCAGAAATTTCAAGGGAGCTCTGCCAGCTATTTATGCTGCAAAATTGCAAGGCATCCAGAAGCCAGCTTCTGGGCAGGTATTTCTTGTTTATGGTTTGCTTGTAAAACCATCGTTTAGAAAAATTATAGTGCATTCTGGTACGGATGTAAAGTTGAATGTCTCCCACGATGGTGTTCTTCTTCCAAAGAATCAATCTCTTGTCAAATCTAAGGGGTTAAATACACAAACGGTTACTACACTAGATCGAGCTAATGCTGAGGATGCCTTGCTTCCAATTCCTAAGGTTTTCGATTCTGATGAGAAAGGGAAAGCATTTCAAAAATCTTCGGATAGAACTAGTAAAGCTGATTATATTGAGATAAAAGATGACATGGCCCAAAGTCAGACTGATGTAATTTGCATGGAGGACCGGCTGAGATCACTAGGGATTCTTCCCAGTGAAAGTGAATATGCATCAAACATTGAACTTTGCTCTACATTGTTAAAGGCTATTGATCTGGAAGCTACTGTTCCGGTGAAAAAGATGAGAGCGGCTGTTTTGTCTATGGAGTCAAATGAGGCATTCAAGCTACTAGAAGTGTTACTGGCTGCATGGCAATCAAGGTCATCTAGTGGAAAGTATATTCTTCCGTGGATATATAGCATATTAGTGAATCATGGTCACAATGTAACTGCTCAGGAATCTGTGACGCATACTCTTGATTCCTTAGACAAGATTACCAAATCTAGAGGTGATACTCTTCAGCATTTGTTACAATTATCAGGTCGTCTACAACTGGTGACATCACAGGTTGACAAGGCTTCTCAGACTATAAGTCATTCGGTGCATGAACTTCCAGCTGAAGAAAATGAAGCAGAAGAAAAGTTGGAATTTTTTCTGAGATTGGGTTCTGAGTTGTCTCTTTTGCGGCTGACAAAGATAGAGGAATAG 1839 0.4192 MASTDIRGILTAFNPSQDFFAITAGDGRVKIWDTLSGQVQTEFADFASTPSTTLLDKSVNGHLALDYTCIKWLSFERKRKRKHASSLLVLGTGSGDVLALDVAAGQLSWRINDCHPGGVRTIASSAHGSSIYTAGADGMVCVIDFMTGNLLEKFKASTKAVSCMCVSPDGKTLATAAAQLKIFNCSNHKKIQKFSGHPGSVRCMVFTEDGKYILSSAVGERYVAVWRIDSAKKQSASCVLAMEHPAVFLDSRCIDSGEHDEAGMCVLAITETGVCYLWFGNSIEELRNAKPTKISLSLEDMSSRNFKGALPAIYAAKLQGIQKPASGQVFLVYGLLVKPSFRKIIVHSGTDVKLNVSHDGVLLPKNQSLVKSKGLNTQTVTTLDRANAEDALLPIPKVFDSDEKGKAFQKSSDRTSKADYIEIKDDMAQSQTDVICMEDRLRSLGILPSESEYASNIELCSTLLKAIDLEATVPVKKMRAAVLSMESNEAFKLLEVLLAAWQSRSSSGKYILPWIYSILVNHGHNVTAQESVTHTLDSLDKITKSRGDTLQHLLQLSGRLQLVTSQVDKASQTISHSVHELPAEENEAEEKLEFFLRLGSELSLLRLTKIEE 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02738 612 ProSiteProfiles Trp-Asp (WD) repeats profile. 12 42 IPR001680 GO:0005515
Cca11g02738 612 PANTHER OS03G0300300 PROTEIN 1 590 - -
Cca11g02738 612 SMART WD40_4 147 184 IPR001680 GO:0005515
Cca11g02738 612 SMART WD40_4 187 227 IPR001680 GO:0005515
Cca11g02738 612 SMART WD40_4 104 144 IPR001680 GO:0005515
Cca11g02738 612 SMART WD40_4 3 33 IPR001680 GO:0005515
Cca11g02738 612 Gene3D - 156 305 IPR015943 GO:0005515
Cca11g02738 612 Gene3D - 6 155 IPR015943 GO:0005515
Cca11g02738 612 PANTHER OS03G0300300 PROTEIN 1 590 - -
Cca11g02738 612 ProSiteProfiles Trp-Asp (WD) repeats profile. 194 236 IPR001680 GO:0005515
Cca11g02738 612 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 12 233 IPR011047 -
Cca11g02738 612 Pfam Dip2/Utp12 Family 472 564 IPR007148 -
Cca11g02738 612 Pfam WD domain, G-beta repeat 10 33 IPR001680 GO:0005515
Cca11g02738 612 Pfam WD domain, G-beta repeat 190 226 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02738 109 228 U-box Gene Family AT2G33340 28.226 1.41e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02738 K14546 - gmx:100815458 952.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02738 11 54760653 54769038 Cca11g02738 11 54760653 54769038 ECH