Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02723 ATGAGAGTTGAGAAAGAAGGAGCAAAAAATGAAGGTGGACACGGCTTTTTCCACTTGTTTGACTGGACCTCAAAATCTCGTAAGAAACTATTTGCAACCAAGTCAGATTTGCCAGAGTCCTTGAAACAGAGAAGAAAGGTTGATGGCAACTTGGCAGCGATGTTGCCCTATCTGGTGGACGAAGATGATGAAATTGGAGTAGGGGAAAGTATTAGAGAAAATGGTGATCATAGTTGTGCATCATCTGTTATAGATGATGAAGTATGTGGAACAAAGGCCCCTGGTGTAGTTGCCAGGCTTATGGGATTAGATTCATTGCCCTCTTCCAGTTTTCCTGATCCATATTTTTCTCCATACTTTGACAACCAATCTCTTCAAGATGTGCAGTATTGGAGGACAAAGTTCAATCATCAGATCCTATATTCTGGAAAATTGAGTGAAAGAGTTGAGGGATCTTCTAGGGCCTTCATGGAGGCAAAGCCTCAAAAGATCCGTAGCAGGCCAATTGAGAAGTTTCAAACAGAAGTAATGCCTCCCAAATCAGCCAAATCTATTCCCCTTACACACCACAAACTTTTGTCCCCAATTAAGAGTCCTGGCTTTGTTCCAACAAATAATGCCACTTACATAATGGAGGCTGCTGCAAGAATCATTGAAACTGGTCCCCAAGCTACTATAAAGGCTAAAACATCTTTGGTAGCATCATCAGCAGTCTCATTGAGGGTTAGAGATCTTAAAGAAAAAGCGGAGGCTTCACAAAAAAGACCTCTAAGTGGGTCATCTTCAGTAACCTCTAGAGTTAGAGATCAAAAAGAAAAAAGAGAAGTTTCTCATAGAACTAGTAGGCTTTCTGAAGCTTCTCAAAGGTCAACTGAGTCTAACGATGCCAAGTATCTAAAGGGACAATCTTTGCACAAAAGTTGGAATGGATCTGTGGATACTCCTGTCAGATTACCTACTCAAGTAGAACAAGATTCTACTTTGAAAAATAAAGGGAAGTCTATTTCACTTGCAATCCAAGCAAAAGTGAATGTTCAAAGAAGGGAAGGTTTGGGTTTTAGCAGTGGAAAAAGTTTGGTGGAGCAAAAGGAACAATGTGACATTAAACCCTCCCAGCAGCCTCTGAAAGCTAATGTTCAAAAAAGTTTACATAAGAAATCTTCTGGTCAAAATGCATCTGGTGTTCTCAGGCAGAATAATCTGAAACAGAATTGTTCAATGGATAAAGACAGACAATCATCAAAGCCATTGGTTTCCAATACACACAATAGAAAAGTTATGAGTGGGGATTCCTCTTGTGGACGTCACAGAAGCTCTAGTAGTAAATCCATTGCAAAATCTATAGTTGGCCTTAAAAAATCATCCATGCAGGTGACAGATAGTGAAAAGGAAGTTCTATATACCCGTGCCAACAATTTCCCTAGGAAGAAGAGGTCCACAGACAGGGAATGGAATGATAGGGTTGTTGATAATTTGTTCATTGACAAAAGTCAGAAGCCTGTTCAGTCTAATCTAGTTAGTAATAAACACCATGGTGGGGCTGCAGAAGTCAAAAAGAAAGACAATGATGTAGTTTCCTTCACATTTACCACACCATTGACAAGAAGCAATTATGGTTTTGACACTGACTATGATAGTACAAGGTCTCCAGTAGTGTACCACGATATTGGTGGTGATGCCTTAGGTATCCTTTTGGATCAGAAGTTGAAGGAATTAACATATGGAGTTGAGAACTCTTATGATGACTCCTTCAGAGCAAGGTCACTTTCCAGTACTGCCCCGAAATCGAAAGATTTGGTACTTAATTCAGTTGACTTCATTCCACGGTTGCAACAGAAGAAAGACCAAGACATGATGTTGACAGATAAGCTATTCAGTAGTCATGAATGTGATTCCTTCACTAGTCTTCCAGAATTATCATACAAACATAGACTTTGGGTTGATAAGATCAATCCTATGGAGGCAGAGTCATTCAATTGCGGACAGCCAAGTCCAATGTCTGTTCTTGACCCTTCCTTTTCTACTGAAAGCTGTGAATCTCCATTCAGCACAAATGCTGCCAGTTTAGAAGATCTAAACAGAAGGAAACAATTTCTGGGCTCAGGAAGTGGCTTGAATTCCTCAAGGAAGCAGTTCCATCCTTTAGAGGCTGCTGATCCAGACTTGTTGGATTCAGCATCAACTTGGAGCATGGAAAAGAAACATGCAAGTACATGGTGTCAAGTGAAGTTCGGAGAATCAAGTACATGGGAGTTGGATTATGTGAATGATATATTGTGTAATGTGGAGTTGATGTTCATGGACTTTGCCCTTGGTAGAGCTCGTGACATTGTGAACCCTCATCTCTTCAACCAGTTGGAAAGTCGAAGGGGAAGGTTTGAGGGTGATGGTGGTGAGTGTAGGATGGGAAGGAAAGTTATATTTGATTGTGTGAGTGAGTGTTTGAACTTGAGATGCAGGCGTTATGTTGGTGGGGGGTACAAAATGTGGACCAAAGGGGTTGCAATGGTGAGAAGAAATGAATGGTTGGCAAGGGAAGTGTATAAGGAAATTTCATGTTGGAGGGATATGGGGGATTCAATGGTGGATGAGCTAGTGGATAGGGACATGAGTATTCAATATGGACAGTGGCTTGATTTTGAGGTTGATACTTTTGAACTTGGTGCAGTGGTTGAAGTCCAAATATTTAATTCTTTGGTTGATGACTTGGTGGATGAAATCATGCAATTATAA 2733 0.4061 MRVEKEGAKNEGGHGFFHLFDWTSKSRKKLFATKSDLPESLKQRRKVDGNLAAMLPYLVDEDDEIGVGESIRENGDHSCASSVIDDEVCGTKAPGVVARLMGLDSLPSSSFPDPYFSPYFDNQSLQDVQYWRTKFNHQILYSGKLSERVEGSSRAFMEAKPQKIRSRPIEKFQTEVMPPKSAKSIPLTHHKLLSPIKSPGFVPTNNATYIMEAAARIIETGPQATIKAKTSLVASSAVSLRVRDLKEKAEASQKRPLSGSSSVTSRVRDQKEKREVSHRTSRLSEASQRSTESNDAKYLKGQSLHKSWNGSVDTPVRLPTQVEQDSTLKNKGKSISLAIQAKVNVQRREGLGFSSGKSLVEQKEQCDIKPSQQPLKANVQKSLHKKSSGQNASGVLRQNNLKQNCSMDKDRQSSKPLVSNTHNRKVMSGDSSCGRHRSSSSKSIAKSIVGLKKSSMQVTDSEKEVLYTRANNFPRKKRSTDREWNDRVVDNLFIDKSQKPVQSNLVSNKHHGGAAEVKKKDNDVVSFTFTTPLTRSNYGFDTDYDSTRSPVVYHDIGGDALGILLDQKLKELTYGVENSYDDSFRARSLSSTAPKSKDLVLNSVDFIPRLQQKKDQDMMLTDKLFSSHECDSFTSLPELSYKHRLWVDKINPMEAESFNCGQPSPMSVLDPSFSTESCESPFSTNAASLEDLNRRKQFLGSGSGLNSSRKQFHPLEAADPDLLDSASTWSMEKKHASTWCQVKFGESSTWELDYVNDILCNVELMFMDFALGRARDIVNPHLFNQLESRRGRFEGDGGECRMGRKVIFDCVSECLNLRCRRYVGGGYKMWTKGVAMVRRNEWLAREVYKEISCWRDMGDSMVDELVDRDMSIQYGQWLDFEVDTFELGAVVEVQIFNSLVDDLVDEIMQL 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02723 910 MobiDBLite consensus disorder prediction 247 316 - -
Cca11g02723 910 Pfam DUF761-associated sequence motif 81 111 IPR032795 -
Cca11g02723 910 MobiDBLite consensus disorder prediction 283 316 - -
Cca11g02723 910 PANTHER EXPRESSED PROTEIN 1 908 - -
Cca11g02723 910 MobiDBLite consensus disorder prediction 266 282 - -
Cca11g02723 910 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 908 - -
Cca11g02723 910 Pfam Domain of unknown function (DUF4378) 751 902 IPR025486 -
Cca11g02723 910 MobiDBLite consensus disorder prediction 367 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02723 Cca-Chr11 54602986 54608025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02723 15 908 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 30.903 4.98e-92 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02723 - - gmx:100804990 1353.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02723 11 54602986 54608025 Cca11g02723 11 54602986 54608025 ECH
Cca11g02723 11 54602986 54608025 Cca08g01736 08 49311694 49315739 PCT