Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02685 ATGGGCACCCAATTAGTACTGTTGTGTCTAGCACTGATACTGAATCTCACTCCATCCCTTGCAAGAACCACATTGAACGAAGGCTATGGTGATGATAGTGGGTGTCCATTAGGGAGTAACATATACCAATACACTTGCCCAGAAGCCGAGGCCATCATATTCTCTTGGGTGGAGCAAGCAGTTTCCGAAGATTCAAGAATGGCAGCCTCACTGCTTAGGCTACATTTCCATGATTGCTTTGTCAATGGTTGCGATGCTTCGGTATTGCTAGATGACACACAGGACTTTGTAGGTGAGAAAACTGCTGCTCCAAATTTGAATTCACTCAGAGGATTCGAAGTAATTGACAAAATCAAATCCGAACTAGAAGTAGTGTGTCCACAGACTGTTTCCTGTGCTGACATATTGGCTACTGCTGCTCGAGATTCAGTTCTTCTGTCTGGAGGTCCAATTTGGGAGGTGCAAATGGGAAGAAAAGATGGTATGAGTGCTAGCAAGGACGCAGCAAATAACAACATCCCAGGCCCAAACTCCACTGTTGAAGTGCTCTTAGCCAAGTTCGAGAACGTGGGCCTTACACTTAAAGACATGGTTGCCCTTTCAGGTGCCCACACAATAGGAAAAGCCCGGTGCAGAACATTCAGCTCTCGTTTACAGAGTAACAGCGACTCAGAAAGTGGCAACATAGATTTCCTGGCATCGTTGCAACAATTGTGCTCGGGACCCGATGGTAGCAACACGGTTGCACATCTTGACCTGGCTACACCTGCCACGTTTGATAATCAATACTTCGTTAATCTTCTCTCTGGGGAGGGGTTGCTCCCTTCAGACCAGGCTCTTGTTAATGGCAATGACCAGACACGACACATTGTGGAAACCTACGTCGAGAATCCCTTAGCTTTCTTCGAGGACTTCAAGGTTTCCATGCTGAAAATGGGAAGCTTGGGATCGCCAAAGAGTAATGGCCAGATTCGTAGGGACTGCCGAACTATTAACTAA 999 0.4665 MGTQLVLLCLALILNLTPSLARTTLNEGYGDDSGCPLGSNIYQYTCPEAEAIIFSWVEQAVSEDSRMAASLLRLHFHDCFVNGCDASVLLDDTQDFVGEKTAAPNLNSLRGFEVIDKIKSELEVVCPQTVSCADILATAARDSVLLSGGPIWEVQMGRKDGMSASKDAANNNIPGPNSTVEVLLAKFENVGLTLKDMVALSGAHTIGKARCRTFSSRLQSNSDSESGNIDFLASLQQLCSGPDGSNTVAHLDLATPATFDNQYFVNLLSGEGLLPSDQALVNGNDQTRHIVETYVENPLAFFEDFKVSMLKMGSLGSPKSNGQIRRDCRTIN 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02685 332 CDD secretory_peroxidase 37 329 IPR033905 GO:0004601|GO:0042744
Cca11g02685 332 ProSitePatterns Peroxidases active site signature. 68 79 IPR019794 GO:0004601
Cca11g02685 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 196 206 IPR019793 -
Cca11g02685 332 Pfam Peroxidase 57 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g02685 332 PRINTS Plant peroxidase signature 46 65 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g02685 332 PRINTS Plant peroxidase signature 70 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g02685 332 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g02685 332 PRINTS Plant peroxidase signature 129 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g02685 332 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g02685 332 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g02685 332 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g02685 332 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g02685 332 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g02685 332 Gene3D - 42 332 - -
Cca11g02685 332 ProSiteProfiles Plant heme peroxidase family profile. 36 332 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g02685 332 SUPERFAMILY Heme-dependent peroxidases 37 332 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca11g02685 332 PANTHER PEROXIDASE 72-RELATED 15 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g02685 332 Gene3D Peroxidase, domain 2 174 312 - -
Cca11g02685 332 PANTHER PEROXIDASE 40 15 331 - -
Cca11g02685 332 PRINTS Haem peroxidase superfamily signature 68 82 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g02685 332 PRINTS Haem peroxidase superfamily signature 130 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g02685 332 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g02685 332 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g02685 332 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02685 Cca-Chr11 54284395 54286143 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02685 41 332 Peroxidase AT4G16270 64.865 1.78e-138 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02685 K00430 - gmx:100787637 571.622