Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02665 ATGTTCTCCCCAAAGTGGTCCATTTTAGTAGCAGATATGAATCTTATTCTGTGTCTCAAGCTCCCATGTTTCTTTCTTTTAATTACTTTGTTTAGTAAAGCATCTGCAATAAATGTAACCTATGAATCTGATAGAATAAACCTCCTTCCTGGCCAACCTTCAAACCCCTTAATCTCACACTTTTCAGGTTACATCACTGTCAATGAAAACCATGGGAGGGCTCTTTTCTATTGGTTCTTTGAAGCTCAATCTGAACCCTCCAAGAAGCCTCTCCTTCTTTGGCTCAATGGAGGACCCGGATGCTCCTCAATTGGGTATGGCGCAGTTGTGGAGATTGGACCACTTTTAGTCAACGAAAATGGTGAAGGATTACATTTCAACAACTACTCCTGGAATCAAGAAGCAAATTTGTTATTTGTGGAGTCTCCTGTTGGAATTGGATTTTCTTATACCAACACAACTTCTGATTTCCCTACCATATTAGAGGATCATTTTGTGGCCGAGGATGCCTACAATTTCTTGGCGAATTGGCTACAAAGATTCCCACAGTTCAAATCCAGGGACTTTTTTATATCAGGGGAAAGTTATGCTGGTCACTATATCCCTCAGCTTGCAGAGTTAATCTTTGATCGAAACAAAGACACCAACAGATACCCCTTTATTAATCTTAAAGGTTTTATCGCAGGGAACCCTGAAACTGATGATTACTATGACAACAAAGGCCTTCTGGAATATGCATGGAGCCACGCAGTTATATCAGATGAGCAATACGACAAAGCAAAACAAGTGTGTGATTTTAAACAATTCTATTGGTCCGATGAATGCAATCATGCCATGGACCAAGTCTTCCAAGATTACAGAGAAATTGACATATATAACATTTATGCCCCGATATGCCGTCTAAACAGCACATCCTCAATAGCTGATGATAACAATAGTAATGATCCTGAATCTTTTGTAAAGGGGAGAAAAAATTATAGACTAAGGAGGATGAGAATCTTCGGGGGCTATGACCCTTGTTACTCAAATTATGCAGAAAAATATTTCAATAGAAAAGATGTTCAGTCATCTTTTCATGCAGATACTGAAAGAGCCACTAAGGTGACATGGAAGGTTTGCGATGATTCCATTTTGCGGACTTACAACTTCTCTGTTTCCTCGGTGCTACCTATCTACTCCAAACTCACCAAGGGTGGACTTAAGATATGGATTTACAGTGGAGACGCGGATGGAAGAGTACCGGTGATAGGGACACGATATTGCGTTGAAGCTCTGGGATTACGTCTCAAATCTAGTTGGCGAACTTGGTATCATCATAATCAGGTTGGAGGAAGGATAGTTGAATATGAAGGATTGACATATGTGACAGTGAGAGGAGCTGGTCACTTGGTGCCACTCAACAAACCCAGTTACATCACCGTCAATGAAAACCATGGGAGGGCTCTTTTCTATTGGTTCTTTGAAGCTCAATCTGAACCCTCCAAGAAGCCTCTCCTTCTCTGGCTCAATGGAGGACCCGGATGCTCCTCCATTGGGACTGGTGCAGTTGTTGAGATTGGACCTCTTTTAGTCAGCAAAAATGGGGAAGGACTACATTTCAACAAATACTCGTGGAATCAAGAAGCAAATTTGTTATTTGTGGAGTCCCCTGCTGGAGTAGGATTTTCTTATACCAACACATCTTCTGATTTCCCCACCATATTAGAGGATCATTTTGTTGCTGAGGATGCCTACAATTTCTTGGTGAATTGGCTACAAAGATTCCCACAGTTCAAATCCAGGGACTTTTTTATATCAGGAGAAAGCTATGCTGGTCACTATATCCCTCAGCTTGCAGAGTTGATCTTTGATCGAAACAAAGATAGCTACAAATACCCCTTTATTAATCTTAAAGGTTTTATTGTAGGGAATCCAGAAACTAATGATTACTATGACTATAAAGGCCTGCTGGAATATGCATGGAGCCACGCAGTTATATCAGACCAGCAATACGACAAAGCAAAACAAGTATGCGATTTTAAACAATTCAATTGGTCTAATGAATGCAATCATGCCATGGACCCAGTCTTCCAAGATTACTTAGAAATTGACATATACAACATTTATGCCCCGGCATGTCGTCTAAACAGCACATCCTCCATAGCTAATGATAACAACAATAACGACCCTGAATCATTTACAAAGATGAGAAATGATTATAGACTAAAGAGGATGAGAATTTTTGGGGGCTATGACCCTTGTTTTTCCAATTATGCAGTAGAATATTTCAATAGAAAAGATGTGCAGTCATCTTTTCATGCAGATACTAAAAGAGCCACTAACGGAACATGGAGTGTTTGCAATAATTCTATATTCGGGGCCTACAATTTCTCTGTTTTTTCGGTTCTACCTATCTACACCAAACTCATCAAGGGTGGGCTTAAGATATGGATTTACAGTGGAGACACAGATGGAAGATGTCCAGTGATAGGGACACGATATTGCGTTGAGGCCCTCGGATTACCTCTCAAGTCTAGGTGGCGAACTTGGTACCATCATAATCAGGTTGGAGGAAGAATAGTTGAATATGAAGGGTTAACATATGTGACAGTGAGAGGAGCTGGTCATATGGTGCCACTGAACAAGCCCAGTGAGGCTCTTTCCCTTATTCATGCTTTCTTAACAGACAAACATCTTCCTACTCGTGGATAA 2691 0.4058 MFSPKWSILVADMNLILCLKLPCFFLLITLFSKASAINVTYESDRINLLPGQPSNPLISHFSGYITVNENHGRALFYWFFEAQSEPSKKPLLLWLNGGPGCSSIGYGAVVEIGPLLVNENGEGLHFNNYSWNQEANLLFVESPVGIGFSYTNTTSDFPTILEDHFVAEDAYNFLANWLQRFPQFKSRDFFISGESYAGHYIPQLAELIFDRNKDTNRYPFINLKGFIAGNPETDDYYDNKGLLEYAWSHAVISDEQYDKAKQVCDFKQFYWSDECNHAMDQVFQDYREIDIYNIYAPICRLNSTSSIADDNNSNDPESFVKGRKNYRLRRMRIFGGYDPCYSNYAEKYFNRKDVQSSFHADTERATKVTWKVCDDSILRTYNFSVSSVLPIYSKLTKGGLKIWIYSGDADGRVPVIGTRYCVEALGLRLKSSWRTWYHHNQVGGRIVEYEGLTYVTVRGAGHLVPLNKPSYITVNENHGRALFYWFFEAQSEPSKKPLLLWLNGGPGCSSIGTGAVVEIGPLLVSKNGEGLHFNKYSWNQEANLLFVESPAGVGFSYTNTSSDFPTILEDHFVAEDAYNFLVNWLQRFPQFKSRDFFISGESYAGHYIPQLAELIFDRNKDSYKYPFINLKGFIVGNPETNDYYDYKGLLEYAWSHAVISDQQYDKAKQVCDFKQFNWSNECNHAMDPVFQDYLEIDIYNIYAPACRLNSTSSIANDNNNNDPESFTKMRNDYRLKRMRIFGGYDPCFSNYAVEYFNRKDVQSSFHADTKRATNGTWSVCNNSIFGAYNFSVFSVLPIYTKLIKGGLKIWIYSGDTDGRCPVIGTRYCVEALGLPLKSRWRTWYHHNQVGGRIVEYEGLTYVTVRGAGHMVPLNKPSEALSLIHAFLTDKHLPTRG 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02665 896 Gene3D - 795 888 - -
Cca11g02665 896 Gene3D - 388 470 - -
Cca11g02665 896 ProSitePatterns Serine carboxypeptidases, serine active site. 598 605 IPR018202 GO:0004185
Cca11g02665 896 ProSitePatterns Serine carboxypeptidases, serine active site. 191 198 IPR018202 GO:0004185
Cca11g02665 896 ProSitePatterns Serine carboxypeptidases, histidine active site. 859 876 IPR033124 GO:0004185
Cca11g02665 896 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 26 471 894 - -
Cca11g02665 896 Gene3D alpha/beta hydrolase 471 708 IPR029058 -
Cca11g02665 896 Gene3D alpha/beta hydrolase 38 309 IPR029058 -
Cca11g02665 896 Gene3D - 747 784 - -
Cca11g02665 896 Gene3D - 340 377 - -
Cca11g02665 896 Pfam Serine carboxypeptidase 471 888 IPR001563 GO:0004185|GO:0006508
Cca11g02665 896 Pfam Serine carboxypeptidase 50 470 IPR001563 GO:0004185|GO:0006508
Cca11g02665 896 SUPERFAMILY alpha/beta-Hydrolases 43 470 IPR029058 -
Cca11g02665 896 PRINTS Carboxypeptidase C serine protease (S10) family signature 534 546 IPR001563 GO:0004185|GO:0006508
Cca11g02665 896 PRINTS Carboxypeptidase C serine protease (S10) family signature 547 557 IPR001563 GO:0004185|GO:0006508
Cca11g02665 896 PRINTS Carboxypeptidase C serine protease (S10) family signature 584 609 IPR001563 GO:0004185|GO:0006508
Cca11g02665 896 PRINTS Carboxypeptidase C serine protease (S10) family signature 859 872 IPR001563 GO:0004185|GO:0006508
Cca11g02665 896 SUPERFAMILY alpha/beta-Hydrolases 471 893 IPR029058 -
Cca11g02665 896 ProSitePatterns Serine carboxypeptidases, histidine active site. 452 469 IPR033124 GO:0004185
Cca11g02665 896 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 26 18 470 - -
Cca11g02665 896 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 18 470 IPR001563 GO:0004185|GO:0006508
Cca11g02665 896 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 471 894 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02665 Cca-Chr11 54052275 54061439 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02665 770 892 Calmodulin-binding Proteins AT2G22960 29.032 3.48e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02665 K16297 - gmx:100815141 826.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02665 11 54052275 54061439 Cca11g02665 11 54052275 54061439 ECH