Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02655 ATGATCGTGAGCCAGAACATGGTAGCGGAAGCGGAAATTATCTGTCAGCAGAGTATTCCGATGTTGGATGTCAAGTATCATATTTGCGTGGCCCAAGAACACAACGTGAAGGTTGAGGTTTCTCCCACCTCACCTTCACCTTCTGCTCCGATCTTTGGCCAAGCAGTGAGTTGCACTGAGATCATTAAAGATTCCATTCTGGAGACTCCTGCAATGAATTTTATCCCAATTGTGCGTTCTGGGAGCTATGCTGAGATTGGACCGCGGGTTTCTATGGATGATGAACACATTTGTATTGATGATCTAGGGGAGCATCTTGGATTTGTGTTCAAGTGCCCCATACCGAGTGCATTTTATGCAATTTTTGATGGTCATGGAGGACCTGATGCAGCTGCTTTTGTTAAGAGGAATGCTATGAGATTATTTTTTGAAGATGTGAACATGCTGCAGGCATATGATACTGATGCACTTTTTCTAAAGAAGTTGGAGGATTCCCATCGGAGAGCTTTTATACGGGCAGATCTTGCCTTGGCTGATGAACAAACTGTCAGCAGTTCATGTGGGACTACTGCATTGACTGCCCTTGTGCTTGGGAGGCATTTGCTTGTTGCTAATGCTGGGGACTGTCGAGCAGTTCTTTGCCGGAGAGGTGTGGCTGTTGAGATGTCCAATGATCACAGGCCAACTTATTTACCAGAGCGAAAGAGGGTGGAGGAGTTAGGTGGATTCATTGATGATGGATACCTCAATGGTTATCTTTCAGTGACCCGTGCCCTTGGAGATTGGGACTTGAAATTTCCACTTGGTGCTGCATCTCCTCTTATTGCTGAGCCGGATGTCCGACTGGTTACATTGACTGAGGCTGATGAGTTTTTGATCGTTGGTTGTGATGGGATTTGGGATGTAATGTCTAGCCAGGTTGCAGTAAGTCTTGTTCGCCGGGGATTAAGAAGGCATGATGACCCACAGCAATGTGCCAGAGAACTAGTCAAGGAAGCATTGCGCCTAAATACATCAGATAATCTCACTGTGATTATTATATGTTTGTCACCCGTTGAAAGCATTGTGGAATCATGTCCGCCCCAAAGGCGGAGATTCAAAGCTTGTAGTCTGTCTGAGGAGGCCCGTAATAGATTGAAGAGTTTGATAGAGGGAAATTGA 1161 0.4565 MIVSQNMVAEAEIICQQSIPMLDVKYHICVAQEHNVKVEVSPTSPSPSAPIFGQAVSCTEIIKDSILETPAMNFIPIVRSGSYAEIGPRVSMDDEHICIDDLGEHLGFVFKCPIPSAFYAIFDGHGGPDAAAFVKRNAMRLFFEDVNMLQAYDTDALFLKKLEDSHRRAFIRADLALADEQTVSSSCGTTALTALVLGRHLLVANAGDCRAVLCRRGVAVEMSNDHRPTYLPERKRVEELGGFIDDGYLNGYLSVTRALGDWDLKFPLGAASPLIAEPDVRLVTLTEADEFLIVGCDGIWDVMSSQVAVSLVRRGLRRHDDPQQCARELVKEALRLNTSDNLTVIIICLSPVESIVESCPPQRRRFKACSLSEEARNRLKSLIEGN 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02655 386 Gene3D - 72 353 IPR036457 -
Cca11g02655 386 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 7 373 - -
Cca11g02655 386 ProSitePatterns PPM-type phosphatase domain signature. 118 126 IPR000222 GO:0043169
Cca11g02655 386 CDD PP2Cc 78 349 IPR001932 -
Cca11g02655 386 SMART PP2C_4 69 347 IPR001932 -
Cca11g02655 386 ProSiteProfiles PPM-type phosphatase domain profile. 79 349 IPR001932 -
Cca11g02655 386 SUPERFAMILY PP2C-like 73 351 IPR036457 -
Cca11g02655 386 PANTHER PROTEIN PHOSPHATASE 2C 7 373 IPR015655 GO:0004722|GO:0006470
Cca11g02655 386 SMART PP2C_SIG_2 94 349 IPR001932 -
Cca11g02655 386 Pfam Protein phosphatase 2C 89 341 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02655 Cca-Chr11 53908737 53911401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02655 1 385 PP2C-type Phosphatase Gene Family AT1G48040 56.892 4.43e-152 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02655 K14803 - gmx:100775577 721.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02655 11 53908737 53911401 Cca11g02655 11 53908737 53911401 ECH
Cca11g02655 11 53908737 53911401 Cca08g01805 08 50394613 50396803 PCT