Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02644 ATGGCTGAATTCAATTCTCTTGAAATGAAGAGAATAAggaaagaagatgagggatttgccataggagtcgaccttggtacaacctactcgtgcgttgcagtgtggcaggagcaactcaatagagtagaaataatccacaaccaacaaggcaacaaaaccacaccttctgttgttgcattcacagacaaacagagattgatcggtgatgctgctaaatatcaagctgccatcaacccagaaaacaccatctttgATGCTAAGAGGTTAATCGGTAGAAAATACAGTGACCCCATTATTCAGAAagataaaatgctatggccattcaaggtcgttgacggtgttaatgacaaacccatgatggtggttaagtacaaggatcaggagaagtttctttgtgctgaggaagtgtcatctatgatccttgtgaagatgagggaGATTGCAGAGGCTTATTTGGAAGCACCTGTGAAGAATGCTGTGGTTACTGTTCCTGCTTATTTCAATGATTCTCAGCGAAAAGCTACCGTAGATGCTGCTGCCATTGCTGGTCTCAATGTTATGCGGATTATAAATGAACCTACAGCTGCAGCTATTGCACATGGCCTTGACAAGAGAACTAACTGTGTTGGAGAACGAAGCATTTTCATCTTTGACCTTGGTGGTGGTACTTTTGATGTGTCTATCCTCAAAATTAAGGACAAGGTCTTCCATGTTAAAGCCACTGCGGGAAACACTCACCTTGGAGGAGAGGACTTTGACAACAGAATGGTGAATTACTTTGTGGAGGAGTTCAAAAGGAAGAACAAAGTGGACATTAGTGGGAACCCGAGAGCCTTAAGAAGGTTGAGAAGTGCATGCCAAAGGGCAAAGAAGATACTCTCTTATGATGTTACTGCCAACATTGAGGTAGATGCTTTATTTCAAGGTACTGATTTCTGCTCTTCAATTAGTCGTGCAAAGTTTGAGGAAATCAATATGGATCTCTTTAAAGAGTGTTTGGAGACAGTAGACAAGTGTCTTACTTATGCTGATATGGACAAGGGTGATATAGATGATGTAGTACTGGTTGGTGGTTCTTCCAGGATTCCCAAAGTGCAGGAGCTACTGCAGGATTTCTTCGAGGGAAAGGGTCTGTGCAAGAGCATAAACCCTGATGAGGCTGTAGCTTATGGTGCAGCTGTGCAAGCTGCTTTGTTGAGTGAAGGCATTAAGAATATTCCAAACTTGGTGTTATTGGATGTTACACCACTGTCACTTGGTATTTCTACACTAGGAGATATCATGAGTGTGGTGATTCCTAAGAACACTACCATTCCTGTAAAGAAGACACGACCATACATAACACCTGAAGATAATGTGTCCCATGTCGGTATTAGTGTTTATGAGGGTGAGAGAAAAAGAGCCAGCGATAACAATTTGTTGGGTTTCTTTAAGCTTTATGGCTTTCCTCCAGCTCCTCGGGGCCATCCTCTTTATGTGTGTTTTGACATAGATGAAAATGGTATCTTAACCGTTTCTGCTGAGGAAAAAACCACTGGCAACAAGAACGAGATTACTATAACTAATGATCAAGGAAGATTGTCAGCAAAAGAAATTAGAAGAATGATTGAAGAGGCAAAGAAATATCAGGATGAAGATAAGAAGTTCCTTAAGAAGGCCAAGTTAATAAATTCCTTGGATAAATATGTTTACAAGATAAGGAATGCTTTGAAGGAGAAGGATATCAATTCTGCAATTAGTAGGGCCACAGATTTGCTTGATGGTGATAACCAGCAAGATGATATTGTTATGTATGAGGGTTGTCTGAAAGAACTTAAGAGCCTCTTTGAAACACTCGAGGCCATGGGCAAGATTGGTTAG 1860 0.329 MAEFNSLEMKRIRKEDEGFAIGVDLGTTYSCVAVWQEQLNRVEIIHNQQGNKTTPSVVAFTDKQRLIGDAAKYQAAINPENTIFDAKRLIGRKYSDPIIQKDKMLWPFKVVDGVNDKPMMVVKYKDQEKFLCAEEVSSMILVKMREIAEAYLEAPVKNAVVTVPAYFNDSQRKATVDAAAIAGLNVMRIINEPTAAAIAHGLDKRTNCVGERSIFIFDLGGGTFDVSILKIKDKVFHVKATAGNTHLGGEDFDNRMVNYFVEEFKRKNKVDISGNPRALRRLRSACQRAKKILSYDVTANIEVDALFQGTDFCSSISRAKFEEINMDLFKECLETVDKCLTYADMDKGDIDDVVLVGGSSRIPKVQELLQDFFEGKGLCKSINPDEAVAYGAAVQAALLSEGIKNIPNLVLLDVTPLSLGISTLGDIMSVVIPKNTTIPVKKTRPYITPEDNVSHVGISVYEGERKRASDNNLLGFFKLYGFPPAPRGHPLYVCFDIDENGILTVSAEEKTTGNKNEITITNDQGRLSAKEIRRMIEEAKKYQDEDKKFLKKAKLINSLDKYVYKIRNALKEKDINSAISRATDLLDGDNQQDDIVMYEGCLKELKSLFETLEAMGKIG 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02644 619 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 399 578 IPR029047 -
Cca11g02644 619 SUPERFAMILY Actin-like ATPase domain 20 204 IPR043129 -
Cca11g02644 619 PRINTS 70kDa heat shock protein signature 19 32 - -
Cca11g02644 619 PRINTS 70kDa heat shock protein signature 49 61 - -
Cca11g02644 619 PRINTS 70kDa heat shock protein signature 71 79 - -
Cca11g02644 619 PRINTS 70kDa heat shock protein signature 159 179 - -
Cca11g02644 619 PRINTS 70kDa heat shock protein signature 222 232 - -
Cca11g02644 619 PRINTS 70kDa heat shock protein signature 350 366 - -
Cca11g02644 619 PRINTS 70kDa heat shock protein signature 382 402 - -
Cca11g02644 619 PRINTS 70kDa heat shock protein signature 408 427 - -
Cca11g02644 619 PRINTS 70kDa heat shock protein signature 488 504 - -
Cca11g02644 619 Gene3D - 84 139 - -
Cca11g02644 619 ProSitePatterns Heat shock hsp70 proteins family signature 2. 216 229 IPR018181 -
Cca11g02644 619 Pfam Hsp70 protein 20 607 IPR013126 GO:0005524|GO:0140662
Cca11g02644 619 PANTHER HEAT SHOCK PROTEIN 70KDA 15 613 IPR013126 GO:0005524|GO:0140662
Cca11g02644 619 ProSitePatterns Heat shock hsp70 proteins family signature 1. 23 30 IPR018181 -
Cca11g02644 619 SUPERFAMILY Actin-like ATPase domain 211 399 IPR043129 -
Cca11g02644 619 Gene3D Actin; Chain A, domain 4 248 331 - -
Cca11g02644 619 PANTHER HEAT SHOCK 70 KDA PROTEIN 15 613 - -
Cca11g02644 619 Gene3D - 21 397 - -
Cca11g02644 619 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 405 559 IPR029047 -
Cca11g02644 619 Gene3D - 205 379 - -
Cca11g02644 619 ProSitePatterns Heat shock hsp70 proteins family signature 3. 353 367 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02644 Cca-Chr11 53712283 53714449 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02644 17 608 Calmodulin-binding Proteins AT3G12580 65.512 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02644 K03283 - gmx:102667578 959.903