Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02615 ATGCTAAATGAGATCACTGAACACTACGCTGCTCTTCAGAATCAGTTTTTGTTGGTGATGCAGCAGAAGAAACTATCTTCACCAGGAAATAATGAGGACGCAAAGAAGGAAAGCAGGCAAGATGACATGGAGAAACCAGTAGTGTTACCCTTCTTGCAGTTCTTAAATACTGGTGAAATCAATAACCTGCAAGGAACATCACAAGAAGCAAAAATCATAGAAGATCAAGCATTTGAGGCTTCTTGCAGGAAAGCAAGAGTGTCCGTGAAGGCACGAGCAGAATCATCTTTGATGGGTGATGAGTGTCAATGGAGAAAATATGGACAAAAGATAGCAAAGGGCAATCCTTGTCCCAGGGCCTACTATCGTTGTAACATGGGAACAGCATGTCCAGTTCGCAAACAGGTTCAAAGGTGTGCTGAGGATGAGAATATTATGATCACAACCTATGAGGGGAATCATAATCATTCACTCCCACCACCAGCCAGGTCCATGGCATGCACAACATCAGCAGCACTCAGCATGTTCCTTTCTGGCTCAACCACCACCACCTTTTCAAATTCATTATCTACTTCTACCTACTATCCATCTGCATCATCATGCCCCACTATAACACTGGACTTAACACACCCCTCAAGTGCTAGTGCTATTTCTTCAAATCATTTCCAACCTTTTCCTCTTTCTTTGCATGGCTATCCTCAACAATCTAAGGGACTACCCTCAAAGAAGAACCTTGACTTGGTGGATGTTGTTTGTGCTGCCATAACCACGGATCCTTCTCTGAAAGCAGTATTAGATTCAGCCATTTCCTCACTCATTCCAGACTCTCACAACATCCATAACCACTGCAGCCAACTTAGTAGCAGCAGGAGTTATTATGATCCTTCTTAG 891 0.4332 MLNEITEHYAALQNQFLLVMQQKKLSSPGNNEDAKKESRQDDMEKPVVLPFLQFLNTGEINNLQGTSQEAKIIEDQAFEASCRKARVSVKARAESSLMGDECQWRKYGQKIAKGNPCPRAYYRCNMGTACPVRKQVQRCAEDENIMITTYEGNHNHSLPPPARSMACTTSAALSMFLSGSTTTTFSNSLSTSTYYPSASSCPTITLDLTHPSSASAISSNHFQPFPLSLHGYPQQSKGLPSKKNLDLVDVVCAAITTDPSLKAVLDSAISSLIPDSHNIHNHCSQLSSSRSYYDPS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02615 296 SMART WRKY_cls 98 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca11g02615 296 ProSiteProfiles WRKY domain profile. 93 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca11g02615 296 Pfam WRKY DNA -binding domain 100 156 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca11g02615 296 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 287 - -
Cca11g02615 296 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 287 IPR044810 GO:0003700
Cca11g02615 296 Gene3D WRKY domain 82 160 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cca11g02615 296 SUPERFAMILY WRKY DNA-binding domain 92 159 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02615 Cca-Chr11 53373926 53377990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02615 70 209 WRKY Transcription Factor Family AT4G04450 61.039 1.85e-58 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Cca11g02615 WRKY 2.1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02615 - - ccaj:109807063 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01299 08 39068258 39075320 Cca11g02615 11 53373926 53377990 PCT