Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02584 ATGTCAAGCTCATCGGAGTATTCAGGTTTTTCCGGCCACCGCCCGGCGGAAAAGTCAACTTTCTCTCAGACTTGTAGTCTATTGAGCCAATACCTCAAGGAAAAGGGCAGCTTCGGAGACCTTAGTCTCGGAATGAGTTGCGCCGTCGAACCAAATGGTTCCCCTGAAACATCGTGTCACTCTGCAACAACCATGGAGTTGTTTCCCACCATCATGACGCAAAGGAACCCCACTGCCATGGATTTCCTCTCTCCGCAAACTGCTTTTCCTCGCCACTCTGAGGTTCCATCCATTGTTAAACCAAGTAAGTTCAAGTTATCTTCCATAACTCTTCTCTTCTTTTGGCCCTTTCTGTCTTCCCCATTTCAATTTCATCGATTCCCCCAATTCGCTCCTATTCAATTAAGTTTTCCAATTCAGGTTTTGGATCGTTCTATAAGTACATGCAGTGTAGTTTGGTTGGTGAATGGCAGCTTCTGA 480 0.4604 MSSSSEYSGFSGHRPAEKSTFSQTCSLLSQYLKEKGSFGDLSLGMSCAVEPNGSPETSCHSATTMELFPTIMTQRNPTAMDFLSPQTAFPRHSEVPSIVKPSKFKLSSITLLFFWPFLSSPFQFHRFPQFAPIQLSFPIQVLDRSISTCSVVWLVNGSF 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02584 159 PANTHER PROTEIN TIFY 10B 1 95 - -
Cca11g02584 159 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 95 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02584 Cca-Chr11 53078895 53093047 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02584 1 92 Tify Gene Family AT1G19180 51.064 1.88e-19 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02584 K13464 - ccaj:109809146 204.912