Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02551 ATGATATTGATGGCGAATGATGAAtacgatgtttttctgagttttaagggtgaaaacgggacccgctacacattcagcgatcatctctttcgagctttgctccgtcacgggatcaacgccttcagagacgaccagagtctgaggagcggcgatgaactcgctccttctctgattcaggcaatcgaaacttccacaatctcagttcttgtgctctgtcaaaactatgcatcttccacttggtgccttgaagaactcgttaagatcattcactgttatgaaaacaaaggaaaacatgttctaccgatattttacttggtggaaccttcggatgtgcggtatcagaaaaacagttatgcaactgccatgactaaacatgaaaacagatacggaatggactccgagaaggtaaaagcatggcgatcagctttGTCAAGAGTATGCGACCTAACTGGAATACATTACAGGAACCATATgtatgaaaccgatgttattgagaagattgttaaagacacctcagctaaactacctcccatgcctttacaaattaagcaactagttggacttgattctcgctttgaacgggtgaaatctttgatagatattaattctaatgatgtcgtttgcatgctggggatttatggagttggaggaataggcaaaaccacatttgttgtggatttgtataacaagatcagacatcaatttgaagctgcaagttttctagctaatgtcagagaaaaatcaaataaaagcattaatggcctggaagatctccaaaggacacttttgtctgagatgggtgaggagacacaaaccattatgggctctacatttagaggaagctctgaaataaaacgcaagcttagacttaaaagagttcttctggttctggatgatgttgatactgtaaaacaattggaatcactagctggcagagatgattggtttggtccaggtagcagaatcattataacaacaagagatgaagatgttctacataagcatgaagttaaaatcaaaagatataagctggaggagctaaattattatgaatctcttgaactcttttgttggtatgcctttaatatgagcagacccgcagaaaactttgcaaacatctccactcttccagtaaggtatgcaaagggtattccgttggcattaagagtaatagggtccaatttgaagggtaggagtgcagaggaatggcaaattgaattgcagaaatataggaaggttccagatgatgaaattcaaggtgtattggaaataagctacaatagcctatctcacttggaccaaaatgttttcctggacattgcttgtttcttcaaaggggaaaaatgggattatgtcaaaagaatactagaagcttgtgatttctacccgaatatacgagtatttgttagtaaatgtctcataactatcgatgaaaatggctgcttggaaatgcatgatctaatacaagacatgggtagagagattgttcggaaggaatcaccatcaaaccctggtaaccggagtagattatggtttcataaagaagttcatgaagtacttgaagaaaattcaGGAAGTACTAGAATTGAAGGAATAATGCTTCATCCCCCGAAACAAGAAAAAATAGATCATTGGACTTTTACAGCCTTCAAGAAGATGAAAAACCTCAGAATTTTGATTGTTCGCAATACAATATTTTCCTTTGGTCCTAGTTATCTACCAAATAGTTTACGGCTACTTGATTGGAAGGGTTACCCATCAAAGTCTTTTCCACTAGACTTTTATCCCCATAGAATTGTTGACTTCAAGTTACCTCATAGTTTTCTGATATTGAGAAAGCCATTTCAGAAATTTGAGGATTTAACATTCATCAATCTTTCCCATTGTCAATCCATAACTCAAATTCCTGACCTATCTGGAGCTAAAAATGTAAAAGTTTTTATACTTGACAAGTGTCATAAACTGGTAAGGTTTGATGAATCCATTGGATTTATGCCTAAGCTTGTGTATTTAAGTGCTTCAGAGTGCACTGTGCTCACAAGTTTTGTGCCAAAAATGTATTTTCCTTCTCTCGAAGTCCTTTCATTTAATTTGTGCAGAAGACTTGAACACTTTCCACATGTAATGAAAAAAATGGATAAGCCATTAAAGATACACATGATGAGTACTGCCATTAAGGAGCTTCCCAAATCCATTGGTAATCTTACTGGGCTTGAGCATATAGACATGTCAATATGCAAAGGGCTTGAAAGTCTATCAAGTAGCTTCTTATTGCTTCCAAAACTCGCCACTTTAAAAATTGATGAATGCTCTCAACTTGGAGGATCATTTAAAAAGTTCAAAGAAAGCCATTCATTGGCAAATGGCTGTCCAAATTTAGTGAAACTTCATTTCTGTGACGCTAATCTATCAGGTGAAGATATTTATGCCATTCTTGAAATTTTTCCAAAATTGGAAGACTTAAATGTATCACATAATGGATTTGTAGCCCTACCAAAATGCATCAAAGGATCTTTTCACTTGAAAAGTCTCGATGTGAGTTTTTGCAGGAATCTTAGGGAAATTCCAGAGCTTCCCTTAAGTATTCAAAAAGTAGATGCAAGACATTGTCTGTCCTTAACTTTAGAGGCATCCAGCGTGCTATGGTCTAAGGCCTCAAATGGAAGAAGACAAGTTGTGATGCCGATGCTGAGAAAGGAAATACCTGAATGGTTTGACTGCATTTGCACTCAAGAGATTCCGCATTTCTGGGCTCGCAGAAAGTTTCCCATTGTTTCCTTAGCATTAGTTTTCAGGGAATCAAAAGAGACTGTGTCTGAAATTGAAGATGCTATAGAATCGTTGAATGGAGTTGTGCACTGGCACACTGTTAGCCTCCACTTGTTTATTGATGGACAAGAAATATGTGGTAGAGATTACCACTATCTCAACGTTGGGGAAGATCATGTGTTATTGTGTGATCTACGCATTTTGTTTAATGATGAAGAGTGGAATGACATTGACACGAGTTTTGGAGATGATTGGAAGGTCATTCAGATTCAATATGATTCAAGCTTGATTCTGAATAACTGGGGAGTTTATGTGCACAAGCAAGAAACAAACATGGATGATATCCAGTTCAGGCTTCCCACTCCCAGCTCCACTAGGGACTACTTGCAAATGCAATCATCACTTTTGGTTCCAAAAGGATCTCCAAAGCAGAAAATGAGACATATGCTGGAAAGTTTTAATCCACGAGACATGTTTAGCAAGAATTTGCCTCTATTAGAATCAGAAGAAGGTCCAGTGAGGTCTTCAAATGTATATTTGAGGTCCTTGAGAAATGCTAAGGCTGAAATTGGAGCAGAAGCTTTAGCCTCTAACTTCGGGGCAAGTTTAAAGCAAGAACATGAAGAATCTGTTGAGGATGTGGTACAAGTTTTAGAGATGATAAAGGAGAATGTACCTAAACATATTGTCGATTCTTACCCTGAAGAAATACAAAGTGTAGGTGGATTAGTGGAAAGAATATTAAGGGCACGTGTAGAATTAATGAAGGAAGATGGGCTGGACATAGGCATGCCTATTCTTCTAGAGTACACTGACAAGGGAGGAGCTACAAAAAGACGCTTTTGGGGAGTGTTGGAGATAAAAGTAGGAGATCCATTTTACAAAGCAGTATTGAGGAAGCAAAACCAACTTTCGTGGGAATTTTGGACCGGCAATGAAGCCTCAATCTCTGGCTCTTGGTTAACAAACTTGAGGGTAACCATTGTTCTATTGAAATGCCAGGGTTCAGCTATAGAGGAAGCTTCAAGCTCTAGCCATGGAGAATCCTTGGAGGATGAATACTACAATCCTGAATTGGAAGAGTTACTGAGGAGAATAGAGCAAGATGCTATGAGCTTGAATAAATCTTATGGGAAAATGAAGGCATCTATTGTTCGAACTGATAAATCAATTTCTGAAGAGCATCTACTTGAAACAATAGCCTTTAGAAGACTAATGATATTGGGAAAATTGACAATGTTTGGTTCCATGACCAAGTTCAAGGTAACACCTTATGGGAAGATAAGGGTAGAGGATGATCCTCTGCGCACTCTAAAGACATGCTTCTGGGTTTTGATGATGGTTCTTGTTGTCCTAATTGTGGGGTTATTTTGTTTTATAGGGTATGTGGGGCTTTTTATTTATAGGGTACCAACAATAAGAAAGTTTCTAGTGTGGGGTTGGTGGCTTGTCATGCAAATTCTTGTGTCTTTTAAATACTTGTATCAAAGAATTAGTAAGATTGTGAAAATAAAGGAGAAGGAATTGTAG 4299 0.2468 MILMANDEYDVFLSFKGENGTRYTFSDHLFRALLRHGINAFRDDQSLRSGDELAPSLIQAIETSTISVLVLCQNYASSTWCLEELVKIIHCYENKGKHVLPIFYLVEPSDVRYQKNSYATAMTKHENRYGMDSEKVKAWRSALSRVCDLTGIHYRNHMYETDVIEKIVKDTSAKLPPMPLQIKQLVGLDSRFERVKSLIDINSNDVVCMLGIYGVGGIGKTTFVVDLYNKIRHQFEAASFLANVREKSNKSINGLEDLQRTLLSEMGEETQTIMGSTFRGSSEIKRKLRLKRVLLVLDDVDTVKQLESLAGRDDWFGPGSRIIITTRDEDVLHKHEVKIKRYKLEELNYYESLELFCWYAFNMSRPAENFANISTLPVRYAKGIPLALRVIGSNLKGRSAEEWQIELQKYRKVPDDEIQGVLEISYNSLSHLDQNVFLDIACFFKGEKWDYVKRILEACDFYPNIRVFVSKCLITIDENGCLEMHDLIQDMGREIVRKESPSNPGNRSRLWFHKEVHEVLEENSGSTRIEGIMLHPPKQEKIDHWTFTAFKKMKNLRILIVRNTIFSFGPSYLPNSLRLLDWKGYPSKSFPLDFYPHRIVDFKLPHSFLILRKPFQKFEDLTFINLSHCQSITQIPDLSGAKNVKVFILDKCHKLVRFDESIGFMPKLVYLSASECTVLTSFVPKMYFPSLEVLSFNLCRRLEHFPHVMKKMDKPLKIHMMSTAIKELPKSIGNLTGLEHIDMSICKGLESLSSSFLLLPKLATLKIDECSQLGGSFKKFKESHSLANGCPNLVKLHFCDANLSGEDIYAILEIFPKLEDLNVSHNGFVALPKCIKGSFHLKSLDVSFCRNLREIPELPLSIQKVDARHCLSLTLEASSVLWSKASNGRRQVVMPMLRKEIPEWFDCICTQEIPHFWARRKFPIVSLALVFRESKETVSEIEDAIESLNGVVHWHTVSLHLFIDGQEICGRDYHYLNVGEDHVLLCDLRILFNDEEWNDIDTSFGDDWKVIQIQYDSSLILNNWGVYVHKQETNMDDIQFRLPTPSSTRDYLQMQSSLLVPKGSPKQKMRHMLESFNPRDMFSKNLPLLESEEGPVRSSNVYLRSLRNAKAEIGAEALASNFGASLKQEHEESVEDVVQVLEMIKENVPKHIVDSYPEEIQSVGGLVERILRARVELMKEDGLDIGMPILLEYTDKGGATKRRFWGVLEIKVGDPFYKAVLRKQNQLSWEFWTGNEASISGSWLTNLRVTIVLLKCQGSAIEEASSSSHGESLEDEYYNPELEELLRRIEQDAMSLNKSYGKMKASIVRTDKSISEEHLLETIAFRRLMILGKLTMFGSMTKFKVTPYGKIRVEDDPLRTLKTCFWVLMMVLVVLIVGLFCFIGYVGLFIYRVPTIRKFLVWGWWLVMQILVSFKYLYQRISKIVKIKEKEL 1432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02551 1432 Coils Coil 1127 1147 - -
Cca11g02551 1432 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 16 1116 - -
Cca11g02551 1432 Gene3D Ribonuclease Inhibitor 719 886 IPR032675 -
Cca11g02551 1432 Gene3D Ribonuclease Inhibitor 539 718 IPR032675 -
Cca11g02551 1432 SMART till_3 8 149 IPR000157 GO:0007165
Cca11g02551 1432 ProSiteProfiles TIR domain profile. 7 175 IPR000157 GO:0007165
Cca11g02551 1432 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 151 IPR035897 -
Cca11g02551 1432 Pfam NB-ARC domain 195 409 IPR002182 GO:0043531
Cca11g02551 1432 Pfam TIR domain 9 182 IPR000157 GO:0007165
Cca11g02551 1432 Gene3D - 346 430 IPR042197 -
Cca11g02551 1432 Gene3D - 6 174 IPR035897 -
Cca11g02551 1432 PRINTS Disease resistance protein signature 209 224 - -
Cca11g02551 1432 PRINTS Disease resistance protein signature 287 301 - -
Cca11g02551 1432 PRINTS Disease resistance protein signature 381 395 - -
Cca11g02551 1432 PRINTS Disease resistance protein signature 733 749 - -
Cca11g02551 1432 SUPERFAMILY L domain-like 498 876 - -
Cca11g02551 1432 Gene3D - 175 343 IPR027417 -
Cca11g02551 1432 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 1116 IPR044974 GO:0006952
Cca11g02551 1432 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 440 IPR027417 -
Cca11g02551 1432 Coils Coil 1279 1299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02551 Cca-Chr11 52662218 52669423 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02551 5 773 WRKY Transcription Factor Family AT4G12020 29.419 2.70e-81 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02551 - - mtr:MTR_4g023040 1837.39