Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02544 ATGGACTCAATTGCTTTCTCCTTGATTTTTTTCATTCTTCAAGTCACAATGCTATCCGCCAAGAAGACTTACATAGTACACATGAAACACGGCCACGATGCCTCCGTCTACCCCACGCACCGTGAGTGGTATAATGCAGCACTCGATGcttcttcttcttcttcttcATACGATTCCATGCTATACGCCTACACCGCTGCTTACAACGGCTTCGCTGCCACCCTCGACCCTCAACAAGCCCAGGCGCTGCGAGCCTCCGATTCTGTCTTGGGCGTCTACGAAGACACGCGCTACACGCTCCACACCACTCGCACCCCCCAGTTCCTGGGCCTCCAGGCCCATTCTTCTTTATGGGAAGACCTCCACCAACCCTCGCACGACGTCGTCATTGGCGTCCTCGACACAGGCGTCTGGCCCGAATCTCTCAGCTTCCACGACTCCCAAATGCCTCAAATCCCCACGCGCTGGCGCGGCAACTGTGAATCCGCACCCGACTTCGACCCTTCCCTCTGCAATAACAAACTCATCGCTGCTCGCACCTTCTCCAAGGGCTACCGCATGGCCTCCGCTAATGCTAGAAAACCTAGGGACCTTGCCTCGCCGCGTGACAACGACGGCCACGGCACGCACACTGCATCCACCGCAGCCGGCTCCTCCGTCGCCAACGCCACTCTCCTCGGCTACGCCACTGGCACTGCGCGCGGGATGGCGCCGCACGCGCGTCTCGCTGCCTACAAAGTCTGCTGGACCGACGGCTGTTTCGCCTCCGACATTCTCGCCGGGATGGATCAGGCAATCCAGGACGGCGTCGACGTcctctccctctccctcggcggctcctcctccgtcCCGTACTACTTCGACACCATCGCCATCGGCGCCTTCGCGGCGGTGGAGAGAGGAATCTTCGTTGCGTGCTCGGCCGGGAATACCGGACCTCGCTCCGGTTCTGTCGCGAATGTCGCTCCGTGGATCATGACCGTCGGCGCCGGAACCCTGGACCGCGATTTTCCGGCGTACGCTACTCTAGGCAACGGGAAACGCTTCGCCGGAGTTTCGCTTTACAGCGGAGAGGGAATGGGAGACGAACCGGTCGGTTTGGTTTATTTCGACGACCGGTCGAACTCGTCGAGCAGCATTTGCATGCCAGGCTCGCTGGACTCCGAGAGCGTGCGCGGGAAGGTGGTGGTGTGCGACCGGGGGCTGAACGCGCGCGTGGAGAAGGGAGCGGTGGTGCGCGATGCCGGAGGCGTCGGGATGATTCTGGCGAACACGGCGGCGAGCGGCGAGGGACTGGTGGCGGACAGTCACGTGGTGGCGGCTGTCGCGGTGGGGGAAAGCGCGGGCGATGAGATCAGACAGTACGCGTCGTTGGATCCTAATCCAACCGCGGTTCTTAGCTTCGCGGGGACCGTGTTGAACGTGAGGCCCTCGCCGGTTGTGGCATCGTTCAGCTCTCGCGGGCCCAATTGCGTGACGGCCCAGATACTAAAACCGGACGTGATTGGGCCTGGAGTGAACATCTTAGCGGGATGGTCCGGAGCGGTTGGCCCATCTGGGTCCCAAGACACACGCAAAACGCGATTCAACATAATGTCTGGTACGTCCATGTCGTGTCCCCACATAAGTGGGTTGGCTGCGCTGTTGAAAGCAGCCCATCCTGATTGGAGTCCAAGTGCGATCAAATCTGCACTCATGACAACGGCCTATACCCATGACAACACCGAGTCTCCACTTCGTGACACAACGGGTGAAGAAGCCTTCTCCACACCGTGGGCCTATGGGGCCGGTCATGTGAACCCTCAAAAGGCCCTCTCTCCTGGGCTTGTTTATGATGCCTCCACCCAGGACTACATTGCGTTTTTGTGCTCCTTGAACTACACCCTTGACCATCTCAGACTCGTTGTCAAGCGTCTTGATGCCAATTGTTCCCTCAAATTTACTGACCCGGGTGACCTCAATTATCCATCTTTCTCCGTTGTTTTCGGAAGCAATAAGGTTGTTCGTTACACGCGCACCTTGACCAACGTGGGGGACCCAGGTTCTGTCTATGACGTGGCTGTGAGCGCGCCCTCCATGGTGGGGATAACGGTGAATCCTAATAGGCTTGCGTTTGGTGAAGTAGGGGAAAGGCAAACGTACACGGTGACGTTCGTGTCCAATAGGAGTCTTAACGATTCCGTTACGTCTGATTTTGGTAGCATCATGTGGAGCAATGAACAGCACCAAGTTAGAAGCCCGGTTGCTTTTACATGGACATATTTTTGA 2268 0.5657 MDSIAFSLIFFILQVTMLSAKKTYIVHMKHGHDASVYPTHREWYNAALDASSSSSSYDSMLYAYTAAYNGFAATLDPQQAQALRASDSVLGVYEDTRYTLHTTRTPQFLGLQAHSSLWEDLHQPSHDVVIGVLDTGVWPESLSFHDSQMPQIPTRWRGNCESAPDFDPSLCNNKLIAARTFSKGYRMASANARKPRDLASPRDNDGHGTHTASTAAGSSVANATLLGYATGTARGMAPHARLAAYKVCWTDGCFASDILAGMDQAIQDGVDVLSLSLGGSSSVPYYFDTIAIGAFAAVERGIFVACSAGNTGPRSGSVANVAPWIMTVGAGTLDRDFPAYATLGNGKRFAGVSLYSGEGMGDEPVGLVYFDDRSNSSSSICMPGSLDSESVRGKVVVCDRGLNARVEKGAVVRDAGGVGMILANTAASGEGLVADSHVVAAVAVGESAGDEIRQYASLDPNPTAVLSFAGTVLNVRPSPVVASFSSRGPNCVTAQILKPDVIGPGVNILAGWSGAVGPSGSQDTRKTRFNIMSGTSMSCPHISGLAALLKAAHPDWSPSAIKSALMTTAYTHDNTESPLRDTTGEEAFSTPWAYGAGHVNPQKALSPGLVYDASTQDYIAFLCSLNYTLDHLRLVVKRLDANCSLKFTDPGDLNYPSFSVVFGSNKVVRYTRTLTNVGDPGSVYDVAVSAPSMVGITVNPNRLAFGEVGERQTYTVTFVSNRSLNDSVTSDFGSIMWSNEQHQVRSPVAFTWTYF 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02544 755 Pfam Peptidase inhibitor I9 23 101 IPR010259 -
Cca11g02544 755 PRINTS Subtilisin serine protease family (S8) signature 125 144 IPR015500 -
Cca11g02544 755 PRINTS Subtilisin serine protease family (S8) signature 203 216 IPR015500 -
Cca11g02544 755 PRINTS Subtilisin serine protease family (S8) signature 533 549 IPR015500 -
Cca11g02544 755 MobiDBLite consensus disorder prediction 187 214 - -
Cca11g02544 755 PANTHER CUCUMISIN-RELATED 14 752 - -
Cca11g02544 755 SUPERFAMILY Subtilisin-like 100 609 IPR036852 GO:0004252|GO:0006508
Cca11g02544 755 Gene3D Peptidase S8/S53 domain 127 618 IPR036852 GO:0004252|GO:0006508
Cca11g02544 755 ProSitePatterns Serine proteases, subtilase family, serine active site. 534 544 IPR023828 -
Cca11g02544 755 Pfam Subtilase family 126 574 IPR000209 GO:0006508|GO:0008236
Cca11g02544 755 Pfam Fibronectin type-III domain 652 749 IPR041469 -
Cca11g02544 755 Gene3D - 334 473 - -
Cca11g02544 755 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 14 752 IPR045051 -
Cca11g02544 755 ProSiteProfiles Serine proteases, subtilase domain profile. 97 605 - -
Cca11g02544 755 SUPERFAMILY Protease propeptides/inhibitors 21 100 - -
Cca11g02544 755 Pfam PA domain 381 452 IPR003137 -
Cca11g02544 755 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 14 101 IPR037045 -
Cca11g02544 755 Gene3D - 622 752 - -
Cca11g02544 755 CDD PA_subtilisin_like 340 464 - -
Cca11g02544 755 CDD Peptidases_S8_3 98 570 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02544 Cca-Chr11 52597529 52599796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02544 8 755 Subtilisin-like Serine Gene Family AT2G05920 64.229 0.0 980
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02544 - - gmx:100786523 1321.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02544 11 52597529 52599796 Cca11g02544 11 52597529 52599796 ECH
Cca11g02544 11 52597529 52599796 Cca08g01372 08 41281360 41283782 PCT