Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02537 ATGGCCTCTTCAAAGTTTAGAAGGACATGTTCCTTCACTAACCTCCTCCTTTCCTGTTTGAATTTGGCCCTATTCATCCTTTCTGCTTCCTCATTTGCACCCACCATTCTCCTCAAGATGCCACCAACTTCATTTGGCATGGCTCTCCTCATGGTCTCTGGCATCTCACTTCTCTCATCTTTTGTGGGCTTCTACTCCCAACTGACACACTTGTGCTTCCTCACCCACACTTCACTTGTAGTGGCCTCGTTGATTGGACAAGTGCTGAGCATATTAGCCTTGTTTACAAAAGAGAAAGCAAGCATGTCCCTGCTGAAGTCACCAAGGGACATCAAAGAAGCCAAACTTTTGGTGAGGCTGGAGTGTGGGGCTCTGATGGCAATGTGCATGCTGCAGATGGTGGTGCTGATGCTGAGTTGTGCAGTGCATAGTTGTTGGGTGAAGGATTATGAGAATCTGGAGGCAGAGAAAGAGGCCTCAGCAAGGAAGAGGAGTAGAAGGGTTGCGGAAGTGCAAGAGGAGTCCATGGCTAATGCCACCAAGATGGCAGAAATCAAAGCTAAGGAGTTGGATGAGAAAATGAAAAGCAAGACCATGGATTCTGGTTTCTTAAACAAGAAGAAGAAACTAGTTTCGTTGCAACTTCCAAGTACAAGAGTAGAAACTATGAGGTTCTGCAATCTCCGTTTTGACCGCATGCAACCTTCGGATCAAGAACTCGAACCACACCTCAGATTTGAGTTTGATGATTTTGTTGCACGAGAAGCCCTTCTTGACGAAGAGTATTGGACCGCAGCGTCGCTAAGGGCAGAAAGTGAGTGGGAAAATGGAACTTTTAAAGAGTGTGGCCTTAGATATAACGAAAATTACAGGAAGAAATTTGTTGATAAGGAATTTAATGACATAAAAACGCGGTGCAAGGAACAAGACGGCGAGAGTAGCACATGCATTATCACGGTGTGGAAGGAGGAGAAGAATGTAAAACGCACAGTAATACAAAGTGTCGTAGGAACCCTTGATTTGAATATCCGAAATTTGATGCTAGAAGAAGTGGTGGAGGCTCATGATTGTTCCATCATCAACCGAACACCATTAAGCAAATATGGTTATATTGCAAACTTGTGTGTGGCCAAATCAGCTCGTCGCATGGGTATTGCAACCAAGATGCTGTATTTTGCTGTCCAACGTGCAAAATCTAATGGTGTGGCACGTGTGTATGCGCATGTGGACAGAAACAATACACCTGCACAGATACTTTTCCATAACTTGGGCTTCGAGGTAGTTGGCTTGGTAAACCCCCTGTTGGTAAAGAATCGAATGTGCTTGCTTCGCTTTGAAATGTAA 1344 0.4472 MASSKFRRTCSFTNLLLSCLNLALFILSASSFAPTILLKMPPTSFGMALLMVSGISLLSSFVGFYSQLTHLCFLTHTSLVVASLIGQVLSILALFTKEKASMSLLKSPRDIKEAKLLVRLECGALMAMCMLQMVVLMLSCAVHSCWVKDYENLEAEKEASARKRSRRVAEVQEESMANATKMAEIKAKELDEKMKSKTMDSGFLNKKKKLVSLQLPSTRVETMRFCNLRFDRMQPSDQELEPHLRFEFDDFVAREALLDEEYWTAASLRAESEWENGTFKECGLRYNENYRKKFVDKEFNDIKTRCKEQDGESSTCIITVWKEEKNVKRTVIQSVVGTLDLNIRNLMLEEVVEAHDCSIINRTPLSKYGYIANLCVAKSARRMGIATKMLYFAVQRAKSNGVARVYAHVDRNNTPAQILFHNLGFEVVGLVNPLLVKNRMCLLRFEM 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02537 447 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 143 447 - -
Cca11g02537 447 CDD NAT_SF 357 408 - -
Cca11g02537 447 Pfam Acetyltransferase (GNAT) family 312 425 IPR000182 GO:0016407
Cca11g02537 447 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 365 431 IPR016181 -
Cca11g02537 447 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Cca11g02537 447 Gene3D - 246 434 - -
Cca11g02537 447 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 288 447 IPR000182 GO:0016407
Cca11g02537 447 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 143 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02537 Cca-Chr11 52514902 52519012 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Cca11g02537 Acetyltransf_1 2.9e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02537 - - ccaj:109807506 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02537 11 52514902 52519012 Cca11g02537 11 52514902 52519012 ECH