Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02495 ATGAAGGGGTCATGTAGTTCGAGCGGTTATTACTTTTGTCTGATCAATATGTTCTTGTTGCTTTTGGCAGTAAGTTCTCAACTGACAACAGACTTCTACAAGTCATCATGTCCTAACGTTTCCAAAATAGTAAGGAGAGAAGTTCAAAAAGCTCTAATGAATGAGATGCGAATGGGTGCTTCCTTGCTTCGCCTTCACTTTCATGACTGCTTTGTTAATGGTTGTGATGGATCAATACTACTAGATGGTGGTGATGATGGAGAGAAGTCTGCTATTCCTAATCTGAACTCTGCTAGAGGATATGATGTTGTAGATACAATCAAAAGTTCAGTGGAGAGTGAATGTCAAGGGGTTGTCTCATGTGCTGATATATTAGCCATCGCTGCCAGAGATTCAGTTTTCCTAAGTGGTGGTCCTTCTTGGAAGGTTCTGCTAGGACGAAGAGATGGAACAGTCTCAAACGGAACACTAGCAAATCAGCTTCCTTCGCCGTTGGATTCATTGGATACCATCATTTCAAAATTTAGTAATTTAGGCCTTAATCTCACAGACGTTGTTTCTTTATCAGGTGCTCATACTTTCGGGCGATCAAGGTGTACACAATTTAGCAATAGATTGTACAACTTCTCAGGAACAGGTGCACCAGACAGTACACTAGACACTGACATGCTCTCTGACTTGCAAAGTTTGTGTCCTAAAAGTGGAGATGGAAACGTAACTACAGTCCTTGATCGAAACTCTTCGGACCTATTTGACAACCACTACTTCAAGAACTTGCTCGTTTCAAGGGGCCTTCTGGGTTCTGACCAGATTCTGTTTTCTAGTGACGAGGCTAACTCAACCACTAAACCTTTGGTCCAAAGCTACAGCAACGATAGTGGACTCTTCTTTGTGGACTTTGCCAATTCTATGATCAGGATGGGGAACATAAACCCAAAGACTGGGTCTGATGGAGAGATTAGGAAGAACTGCAGAGTGATCAATTCTTAG 990 0.4212 MKGSCSSSGYYFCLINMFLLLLAVSSQLTTDFYKSSCPNVSKIVRREVQKALMNEMRMGASLLRLHFHDCFVNGCDGSILLDGGDDGEKSAIPNLNSARGYDVVDTIKSSVESECQGVVSCADILAIAARDSVFLSGGPSWKVLLGRRDGTVSNGTLANQLPSPLDSLDTIISKFSNLGLNLTDVVSLSGAHTFGRSRCTQFSNRLYNFSGTGAPDSTLDTDMLSDLQSLCPKSGDGNVTTVLDRNSSDLFDNHYFKNLLVSRGLLGSDQILFSSDEANSTTKPLVQSYSNDSGLFFVDFANSMIRMGNINPKTGSDGEIRKNCRVINS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02495 329 PANTHER PEROXIDASE 59 10 327 - -
Cca11g02495 329 SUPERFAMILY Heme-dependent peroxidases 27 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca11g02495 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Cca11g02495 329 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g02495 329 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g02495 329 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g02495 329 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g02495 329 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g02495 329 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g02495 329 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g02495 329 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g02495 329 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g02495 329 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Cca11g02495 329 Gene3D - 32 328 - -
Cca11g02495 329 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g02495 329 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g02495 329 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g02495 329 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g02495 329 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g02495 329 CDD secretory_peroxidase 27 327 IPR033905 GO:0004601|GO:0042744
Cca11g02495 329 Gene3D Peroxidase, domain 2 162 307 - -
Cca11g02495 329 ProSiteProfiles Plant heme peroxidase family profile. 27 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g02495 329 Pfam Peroxidase 44 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g02495 329 PANTHER PEROXIDASE 72-RELATED 10 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02495 Cca-Chr11 52116556 52118377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02495 14 328 Peroxidase AT5G19890 61.635 4.72e-144 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02495 K00430 - gmx:100787073 563.148