LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cca11g02459	ATGGAAAACGATGAAGAATGCATCACTGGGTTGTGTTTGGGACTGGGAATGGGAGGGCATGTTCCTAAAAGGGCTAAGCATAAAGAGAACAAGCCTGTGAAGTGCCTTGACCTAGCGTTTGAGCTTTGTCCAAAAGAAGAAGCCATGAACGTGAATCATAATATTGATTCTGATAACCCCAATGAAAAGAGCACCGATTCTGATaacagcaacaacaacaacaacaGCGGTTGCAGAAAGAAACTGAGGCTTTCCAAGGAGCAATCAGCCATGCTTGAGAACAGCTTCAAACTACATAGCACTCTTAATCCGGTTCAGAAACAAGCACTTGCTGATCAATTGAATTTAAAGGCTAGACAAGTTGAAGTTTGGTTTCAGAACCGAAGAGCAAGGACGAAGCTGAAACAGACAGAAGTGGACCGGGAGTTTTTGAAAAAGCACTGTCAAAATCTAAGTGATGAGAACAGACGATTGAAGAGGGAATTGCAGGAACTACGTGCACTTAAGGTTGGACCGTCGCAGTTATGCATTCAACTATCCAAAACTACGACTCTGACTATGTGTTCTTCGTGCGAGAAACTAGGAAAGAACAATATAGAGTTAGAGGGTAGAAATTAA	618	0.4094	MENDEECITGLCLGLGMGGHVPKRAKHKENKPVKCLDLAFELCPKEEAMNVNHNIDSDNPNEKSTDSDNSNNNNNSGCRKKLRLSKEQSAMLENSFKLHSTLNPVQKQALADQLNLKARQVEVWFQNRRARTKLKQTEVDREFLKKHCQNLSDENRRLKRELQELRALKVGPSQLCIQLSKTTTLTMCSSCEKLGKNNIELEGRN	205

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Cca11g02459	205	ProSiteProfiles	'Homeobox' domain profile.	75	135	IPR001356	GO:0003677
Cca11g02459	205	PANTHER	-	10	196	-	-
Cca11g02459	205	SUPERFAMILY	Homeodomain-like	64	136	IPR009057	-
Cca11g02459	205	Pfam	Homeodomain	79	133	IPR001356	GO:0003677
Cca11g02459	205	SMART	halz	135	178	IPR003106	GO:0006355\|GO:0043565
Cca11g02459	205	MobiDBLite	consensus disorder prediction	51	79	-	-
Cca11g02459	205	PANTHER	HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN	10	196	-	-
Cca11g02459	205	SMART	HOX_1	77	139	IPR001356	GO:0003677
Cca11g02459	205	ProSitePatterns	'Homeobox' domain signature.	110	133	IPR017970	GO:0000981\|GO:0006355
Cca11g02459	205	MobiDBLite	consensus disorder prediction	53	79	-	-

Showing 1 to 10 of 13 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Cca11g02459	Cca-Chr11	51666156	51667907	Dispersed/Wgd

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Cca11g02459	70	194	Homeobox Transcription Factor Family	AT4G16780	67.200	3.27e-52	167

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	HB-other	Cca11g02459		Homeodomain	5.2e-16	CL0123

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cca11g02459	K09338		-	gmx:100812222	298.516

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Cca11g02459	11	51666156	51667907	Cca08g01471	08	43610334	43611869	PCT

Showing 1 to 1 of 1 entries