Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02430 ATGAGTGAGTGCACTTGCGTGTACGTGAATCAAGTCAATTGGTGTGAATCTTGGAAGCTATTGGAGTTGGGTTTGATAAGTGAGCCTATCATTAGTTACACTGGAGGTATTGATGGGTTTGAAGCTACTGCAGCAGAATCTGATGAGAAGATTGATACCGCAAGTGAACTGGTTACTTCTTACGCTCGCCATCTTGAAAAAAAACATGACATGCTTCTGGGATTACTGTTTGAGCAAGGAACATACCAGAAACTCTATAGCTATCGACATCTTATAAATGGGTTTGCTGTTCATATTTCACCTGAACAGGCAGAAACTCTAAGACGTGCTCCTGGAGTGAAATCAGTTGAGAGGGACTGGAAAGTTAAGAGACTTACAACTCATACCCCACAATTTTTAGGGCTTCCAACTGGGGTTTGGCCAACAGGTGGAGGCTTTGACCGGGCTGGAGAAGACATTGTGATTGGATTTGTGGACTCAGGGATATATCCTCATCACCCAAGTTTTGCTACTCAAAATACTGAGCCATATGGGCCAGTTCCTAAGTATAGAGGAAAATGTGAATCTGATCCAGATACTAAAAAAAATTTCTGTAATGGAAAGATCGTTGGAGCACAACACTTTGCTCATGCTGCAATAGCTGCTGGGTCATTTAACCCTTCAATTGACTTTGCCTCTCCTCTAGACGGGGATGGACATGGAAGTCATACAGCCTCTATTGCAGCTGGAAATAATGGAATTCCTGTGAGGATGCATGGCCATGAATTTGGGAGAGCAAGTGGGATGGCTCCTCGAGCTAGGATTGCTGTGTACAAGGCACTCTATAGACTGTTTGGAGGGTATGTTGCAGATGTAGTTGCTGCAATTGATCAGGCTGTATATGATGGAGTGGATATACTCAGCCTTTCAGTTGGACCCAGCAGTCCTCCAGCAGCCACCAAAACTACATTTTTGAACCCTTTTGATGCTACACTTCTTGGAGCTGTGAAAGCTGGTGTATTTGTCGCACAGGCTGCTGGAAATGGTGGTCCTTTTCCTAAGACATTGGTTTCATATAGTCCATGGATAGCATCGATAGCAGCTGCAATTGATGATCGTAGATATAAAAACCATTTGATCCTTGGAAATGGAAAAACCTTAGCTGGAATTGGGTTATCACCTTCCACACATTTAAACGAAACATACACATTGGTTGCTGCAAATGATGTGTTGCTAGATTCGTCAGTTATGAGGTACAACCCCACGGATTGCCAGAGACCAGAGCTTTTAAACAAGAACTTGATAAAGGGCAATATTCTTCTCTGTGGATACTCCTTCAACTTTGTCGTTGGCACTGCATCAGTCAAGAAAGTTTCAGAAACAGCAAAGGCCCTTGGTGCAGTTGGATTTGTTCTTTGTGTTGAAAATGTTTCTCCAGGAACAAAATTTGATCCAGTCCCTGTTGGCCTTCCTGGGATTCTCATCACAGATGTCAGCTATTCAAAGGAACTTATAGATTATTATAATATCACTACACCAAGAGACTGGACTGGGCGGGTAAAGAGTTTCAAAGGTACAGGTAAAATTGGCGACGGTTTGATGCCTATTCTGCATAAATCTGCACCACAGGTGGCATTATTCTCTGCTCGAGGGCCAAATATAAAGGACTTCAGCTTCCAAGAGGCAGATCTTCTGAAACCAGATATATTAGCTCCTGGTTCATTGATTTGGGCTGCTTGGTGTCCAAATGGAACCGATGAGCCAAATTATGTCGGTGAGGGGTTTGCCATGATATCTGGAACCAGCATGGCTGCACCACATATAGCTGGAATTGCTGCTCTCATAAAGCAGAAGCATCCTCATTGGAGCCCTGCAGCCATTAAATCAGCTTTGATGACAACATCAACAACTCTAGACAGAGCTGGGAATCCTCTTCTAGCCCAGCAAACTTCTGAATCAGAAGCTATGAAGCTGGTCAAAGCTACTCCTTTTGATTATGGAAGTGGACATGTTGATCCAACAGCTGCCTTGGACCCTGGACTCATCTTTGATGCAGGATACGAGGATTATCTAGGCTTCTTGTGCACAATACCCAACATTGATGTTCATGAGATAAATAACTATACTCACACACCATGTAACACCACCATCGAGACCTACGTGATGACAGCCAGAATGGAGCCAGCTGTTGCCATTGAAGTCAGCCCTCCTGCCATGACTATCAAAGCAGGCGCATCGCAGAAGTTTTCGGTGACACTCACAGTGCGGTCAGTCACAGGAACGTATAGTTTTGGGGAGGTTTTGATGAAAGGGAGCAGAGGGCACAAGGTGAGGATTCCAGTTCTGGCCAATGGATACCGACGGTAG 2346 0.4429 MSECTCVYVNQVNWCESWKLLELGLISEPIISYTGGIDGFEATAAESDEKIDTASELVTSYARHLEKKHDMLLGLLFEQGTYQKLYSYRHLINGFAVHISPEQAETLRRAPGVKSVERDWKVKRLTTHTPQFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFATQNTEPYGPVPKYRGKCESDPDTKKNFCNGKIVGAQHFAHAAIAAGSFNPSIDFASPLDGDGHGSHTASIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGYVADVVAAIDQAVYDGVDILSLSVGPSSPPAATKTTFLNPFDATLLGAVKAGVFVAQAAGNGGPFPKTLVSYSPWIASIAAAIDDRRYKNHLILGNGKTLAGIGLSPSTHLNETYTLVAANDVLLDSSVMRYNPTDCQRPELLNKNLIKGNILLCGYSFNFVVGTASVKKVSETAKALGAVGFVLCVENVSPGTKFDPVPVGLPGILITDVSYSKELIDYYNITTPRDWTGRVKSFKGTGKIGDGLMPILHKSAPQVALFSARGPNIKDFSFQEADLLKPDILAPGSLIWAAWCPNGTDEPNYVGEGFAMISGTSMAAPHIAGIAALIKQKHPHWSPAAIKSALMTTSTTLDRAGNPLLAQQTSESEAMKLVKATPFDYGSGHVDPTAALDPGLIFDAGYEDYLGFLCTIPNIDVHEINNYTHTPCNTTIETYVMTARMEPAVAIEVSPPAMTIKAGASQKFSVTLTVRSVTGTYSFGEVLMKGSRGHKVRIPVLANGYRR 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02430 781 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 43 124 IPR037045 -
Cca11g02430 781 ProSitePatterns Serine proteases, subtilase family, serine active site. 593 603 IPR023828 -
Cca11g02430 781 Pfam Subtilase family 150 634 IPR000209 GO:0006508|GO:0008236
Cca11g02430 781 ProSiteProfiles Serine proteases, subtilase domain profile. 119 670 - -
Cca11g02430 781 CDD PA_subtilisin_like 372 510 - -
Cca11g02430 781 PANTHER CUCUMISIN-RELATED 44 706 - -
Cca11g02430 781 PANTHER CUCUMISIN-RELATED 707 780 - -
Cca11g02430 781 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 155 166 IPR023827 -
Cca11g02430 781 SUPERFAMILY Protease propeptides/inhibitors 82 122 - -
Cca11g02430 781 Pfam Fn3-like domain 701 774 IPR010435 GO:0004252|GO:0005618|GO:0016020
Cca11g02430 781 Gene3D - 697 778 - -
Cca11g02430 781 CDD Peptidases_S8_3 126 629 IPR034197 -
Cca11g02430 781 Gene3D Peptidase S8/S53 domain 152 683 IPR036852 GO:0004252|GO:0006508
Cca11g02430 781 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 44 706 IPR045051 -
Cca11g02430 781 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 707 780 IPR045051 -
Cca11g02430 781 SUPERFAMILY Subtilisin-like 125 674 IPR036852 GO:0004252|GO:0006508
Cca11g02430 781 PRINTS Subtilisin serine protease family (S8) signature 592 608 IPR015500 -
Cca11g02430 781 PRINTS Subtilisin serine protease family (S8) signature 229 242 IPR015500 -
Cca11g02430 781 PRINTS Subtilisin serine protease family (S8) signature 150 169 IPR015500 -
Cca11g02430 781 Pfam Peptidase inhibitor I9 60 123 IPR010259 -
Cca11g02430 781 Gene3D - 365 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02430 Cca-Chr11 51256553 51261761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02430 28 781 Subtilisin-like Serine Gene Family AT2G19170 78.272 0.0 1277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02430 - - gmx:100787619 1402.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02430 11 51256553 51261761 Cca11g02430 11 51256553 51261761 ECH
Cca11g02430 11 51256553 51261761 Cca08g01508 08 44481244 44488521 PCT