Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02418 ATGGCAGTGACCTTAAAAGGTTGTTACACCGTGAAGCCTACGGAGAAAACATGGTGCGGACGCTTAGCTTTATCCGAATTGGATCAAACAGAACAAGTATCCCACGTTCCCAAAATCTACTTCTACCACCCCCCAGAAAACTGCAAGTACCCCACCATTGCTTCCACCTTGAGAGACTCACTGAGCCGAGTCCTGGTGCCGTTTTATCCCCTAGCCGGTCCTTTACACTGGATAAACAACGGTCGTTTAGAGCTCCATTGCAACGCCTCGGGGGTTTCCTTCATCGAAGCCGAATCCTCATCGAGTTTACAACATCTCAGTGACGACTTTAACTTGTACCGCCTCCTTGCCCCCACCGTGGACTACACGCTCCCAATTCACCAAAATCCGTTGCTTCTGATTCAGCTAACGAGGTTCTCCTGCGGCGGCATCAGCATCGGCCTCACGATTTCACACGTGGTGGTGGACGGACCCAGCGCGTCGCACTTCATTTGCGAGTGGGCGAGGCTCGCGCGCGGGGAGCCGCTGCAAACGGCGTCGTTTCATGACCGGAGGGTGCTTCGCGCGGGGGAGCCTCCTTCGGTGCCGCTAACGGAATGCCACGTGCACGTGGAGTTCGATCTCCCTCCGTTGCTGCTCGGGAAAAACGACAACGCCGAGGAAAGGAAGAAGAAAACGACGATGGCTGTTCTGGAACTGAGCAAAACGCAAGTTGAGACGTTGAGAAAGAGAGCGAATGGCAATTATAGCCGTTACGAGAGTGTAGCTGGTCACATATGGAGAAGTGCATGCATGGCTAGAGGGCTTAAAGAGGAGCAACCAACCATGCTTAGTATCACCGTTGACTTGAGGCGTCGCATAAAACCACCTTTGCCAGAAGGGTATTTTGGGAATGCGACTTTGGACACAGTTGCTTCTGGCCTTGTGGGTGATTTGGTGTTGGAACCGTTGGGGTATACGTGTAGTATAATAAGGGCTGCGATTGAGAAAGTGAATGATGACTACGTTTGGTCGGGGATTGAGTTTCTGAAGAATCAAGAGGATTTGCGTAGGTTTCATCTGGATGCTATTGCGAAAGAGAGTGAGGAGGAGGTTTTCTATGGGAACCCTAATTTGAGTGTGGTTAGTTGGTTGACTTTGCCCATGTTTGGCGTTGACTTTGGGTGGGGAAAGGAGGTTTATATGAGACCAGCAACACATGACTTCGATGGAGATTTTAAGCTTCTACCTGGTCCAGTTGGTGGATCTTTTGTGGTTGCTTTAGGTCTGCAAGTGGAGCATATGGATGCGTTTAAGAAGCATTTTTACCGGGACATTGAGTAA 1323 0.5057 MAVTLKGCYTVKPTEKTWCGRLALSELDQTEQVSHVPKIYFYHPPENCKYPTIASTLRDSLSRVLVPFYPLAGPLHWINNGRLELHCNASGVSFIEAESSSSLQHLSDDFNLYRLLAPTVDYTLPIHQNPLLLIQLTRFSCGGISIGLTISHVVVDGPSASHFICEWARLARGEPLQTASFHDRRVLRAGEPPSVPLTECHVHVEFDLPPLLLGKNDNAEERKKKTTMAVLELSKTQVETLRKRANGNYSRYESVAGHIWRSACMARGLKEEQPTMLSITVDLRRRIKPPLPEGYFGNATLDTVASGLVGDLVLEPLGYTCSIIRAAIEKVNDDYVWSGIEFLKNQEDLRRFHLDAIAKESEEEVFYGNPNLSVVSWLTLPMFGVDFGWGKEVYMRPATHDFDGDFKLLPGPVGGSFVVALGLQVEHMDAFKKHFYRDIE 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02418 440 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 439 - -
Cca11g02418 440 Pfam Transferase family 1 436 - -
Cca11g02418 440 Gene3D - 1 207 IPR023213 -
Cca11g02418 440 SUPERFAMILY CoA-dependent acyltransferases 105 175 - -
Cca11g02418 440 Gene3D - 215 437 IPR023213 -
Cca11g02418 440 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 5 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02418 Cca-Chr11 51076686 51078213 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02418 1 436 Monolignol Biosynthesis Gene Families AT5G48930 35.955 2.11e-92 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02418 K13065 - gmx:100777532 664.455