Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02376 ATGAATTACTTGTCAAACTTTATAGGCGGCTTGAAGAATTTAACAGATGTAGGAATTGAGAATCCCGTGGATTACCAAGTGGACAACTTTTTCTCCCAAAAAAGAGGTTGCTTATCTGCTGTGGTCTCACAAGTTTGCAATTTTAAGATTTGGCAATTTAGGGTATTATTGGAGGAGAGAGTGTATATGCAGAAACCGACAACGGACGCAATTAGTATGGGGAAAAGGAACTTGGAGGGTGGAGAAGATGACCAGCCTGAACGTAAGAGGCCTGCTCTTGCCAGTGTAATTGTGGAAGCTCTCAAGGTGGACAGTTTGCAGAAGCTTTGCTCATCTTTAGAACCTATTCTTCGTAGAGTTGTGAGTGAAGAAGTGGAGCGTGCTTTGGCAAAGTTAGGTCCTGCAAGACTTGGTGGAAGGTCACCTCCTAAAATGATTGAAGGCCCAGATGGTAGAAACTTGCAGCTACAGTTTAGGTCCCGGCTATCTCTTCCCCTATTCACTGGAGGAAAAGTGGAAGGCGAGCAGGGGGCTCCAATTCATGTTGTTCTGATTGATGCCAATAGTGGAAATGTTGTAACATCTGGACCTGAATCATGTGTTAAACTAGATGTTGTTGTCCTTGAAGGGGATTTCAACAATGAAGATGATGAAGATTGGACTCAAGATGATTTTGAAAGTCATGTGGTAAAAGAACGTGAAGGAAAGAGACCTTTGTTGACTGGGGACCTGCAAGTGACACTCAAGGAAGGAGTTGGAACATTAGGGGAACTGACATTTACAGATAATTCAAGCTGGATAAGGAGCCGCAAATTCAGGCTTGGCCTGAAGATTGCATCAGGTTTTGGAGAATCCATTCGCATTCGTGAAGCTAAGACAGTGGCTTTCACAGTTAAAGATCATAGAGGAGAATTATATAAGAAGCATTATCCCCCTGCATTGACTGATGAAGTATGGAGATTGGAGAAGATAGGCAAGGATGGGTCATTTCACAAGAAGCTGAATAATGCAGGAATAACCACAGTTGAAGACTTTCTTCGGCTGGTGGTTAAGGATCAACAGAAGTTGCGGAATATCCTTGGGAGTGGTATGTCAAACAAGATGTGGGAGGCTCTCTTAGACCATGCGAAGACATGTGTTCTAAGTGGGAAGCTCTATATTTATTATCCAGAAGATACAAGAAATGCTGGCATTATTTTTAACCACATCTATGAGTTGCGAGGCCTTATAACAGGAGAACAATTCTTTTCTGCCGACTCTCTCACTGATAGCCAGAAGGTTTATGTAGATTCATTGGTGAAGAAAGCATATGACAATTGGGATCAGGTCGTGGAGTATGATGGCAAATCACTCGTGAATGCTAACCAAAATAACAGGTCTGCCACATCTGAAAATGAACTTCGTGTTGAGTCAATTGATTATGGTAGTGGTTTAGTGGATCATCACCTGCAACTGCCGACCATCCCAGTGTCTGTTCCTTCTGAACAACAAATTAATTCAGGGATATCTGTTGGAAGTTATAATGATAATATAGTAACACGATATCCAACCCAGTCATTGATTTCAAACTCCAGCTCCCGGAGTCAGTTTGAGAGCTCATTGTATCTGTCTAATGAGCAATTAATCAGCAATGCTCACCAAACCCAAAGCACTAGTAATGATCATGGCACAGTTGGGGACAAGGGGGTTGATGAATTCTTTTCGGAAGAAGAAATCCGCCTCAGAAGTCACGAGATGCTAGAGAATGAAGATATGCAGCACTTGCTTCGCCTCTTCAGCATGGGAGGTCATGCTTCCATAAATGCTGAGGATGGCTATTCATTCCCATCATTCATGCCATCTCCCAATATTCCAAACTATGACGAGGATCGCTCTCGCCCAGGCAGAGCTGTTGTGGGATGGCTGAAGATTAAGGCAGCAATGAGATGGGGCTTCTTTATCAGGAAGATAGCAGCTGAGAAACGGGCACAGATAGAGGAGTTAGATGATTAG 1992 0.4307 MNYLSNFIGGLKNLTDVGIENPVDYQVDNFFSQKRGCLSAVVSQVCNFKIWQFRVLLEERVYMQKPTTDAISMGKRNLEGGEDDQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPARLGGRSPPKMIEGPDGRNLQLQFRSRLSLPLFTGGKVEGEQGAPIHVVLIDANSGNVVTSGPESCVKLDVVVLEGDFNNEDDEDWTQDDFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKIASGFGESIRIREAKTVAFTVKDHRGELYKKHYPPALTDEVWRLEKIGKDGSFHKKLNNAGITTVEDFLRLVVKDQQKLRNILGSGMSNKMWEALLDHAKTCVLSGKLYIYYPEDTRNAGIIFNHIYELRGLITGEQFFSADSLTDSQKVYVDSLVKKAYDNWDQVVEYDGKSLVNANQNNRSATSENELRVESIDYGSGLVDHHLQLPTIPVSVPSEQQINSGISVGSYNDNIVTRYPTQSLISNSSSRSQFESSLYLSNEQLISNAHQTQSTSNDHGTVGDKGVDEFFSEEEIRLRSHEMLENEDMQHLLRLFSMGGHASINAEDGYSFPSFMPSPNIPNYDEDRSRPGRAVVGWLKIKAAMRWGFFIRKIAAEKRAQIEELDD 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02376 663 Pfam Calmodulin binding protein-like N-terminal domain 154 301 IPR046831 -
Cca11g02376 663 PANTHER OS02G0177800 PROTEIN 559 662 IPR012416 GO:0005516
Cca11g02376 663 Pfam Calmodulin binding protein C-terminal domain 384 446 IPR046829 -
Cca11g02376 663 PANTHER OS02G0177800 PROTEIN 70 556 IPR012416 GO:0005516
Cca11g02376 663 PANTHER CALMODULIN-BINDING PROTEIN 60 B 559 662 - -
Cca11g02376 663 Pfam Calmodulin binding protein central domain 314 379 IPR046830 -
Cca11g02376 663 PANTHER CALMODULIN-BINDING PROTEIN 60 B 70 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02376 Cca-Chr11 50461788 50474644 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02376 63 658 Calmodulin-binding Proteins AT5G57580 63.665 0.0 809
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02376 - - gmx:100803029 1064.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02376 11 50461788 50474644 Cca11g02376 11 50461788 50474644 ECH