Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02366 ATGGATCCCTTTCTCGATTTTGATTACTCAAACTCCTTCCAAAACAACAACAGCACCACAAACGACAGCGTGGTTCCAGTTCAAAGCAAGCCCTCTCTGCCTCCCCCGCTCATGAATAACCACCACCAATCAGAGAATTGCTTCGACATCGACTTTTGCCGCTCCAAGCTATCGTCCTTTAACTATCCATCACAGTCTCTTAGCCAAAGCGTTTCGTCGTCGTCGCTAGATGTTGGAGTGGTGCCGGATGGGAACACGGTGTCGGAGATATCGTACTCGTTTGGTCGGAACAGTTCGGATTCGAGTGGAATTGCTGTGTCAGGGGGAAGTGCGGCGACCCAGTTGTGTGGGATGGACCGTGAAGCGAGGGTGCTGCGATACAGAGAGAAGAGGAAGAACAGAAAGTTCGAGAAGACTATTCGATACGCTTCGAGAAAGGCTTATGCGGAAACCCGGCCCAGGATTAAAGGGCGGTTCGCCAAGCGAACCGAAATTGATTCCGACGTGGACCGTCTCTACAGCCCTGCAACGGCTGCTGCGCTCATGCTCGACACTCCATACGGCGTCGTGCCCTCGTTTTAG 582 0.5258 MDPFLDFDYSNSFQNNNSTTNDSVVPVQSKPSLPPPLMNNHHQSENCFDIDFCRSKLSSFNYPSQSLSQSVSSSSLDVGVVPDGNTVSEISYSFGRNSSDSSGIAVSGGSAATQLCGMDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEIDSDVDRLYSPATAAALMLDTPYGVVPSF 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02366 193 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 1 193 IPR045281 GO:0009909
Cca11g02366 193 MobiDBLite consensus disorder prediction 13 40 - -
Cca11g02366 193 Pfam CCT motif 120 162 IPR010402 GO:0005515
Cca11g02366 193 ProSiteProfiles CCT domain profile. 120 162 IPR010402 GO:0005515
Cca11g02366 193 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 5 1 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02366 Cca-Chr11 50323095 50323776 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02366 1 193 C2C2-CO-like Transcription Factor Family AT5G57660 57.868 2.25e-58 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Cca11g02366 CCT 3.2e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02366 - - gmx:100805693 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02366 11 50323095 50323776 Cca11g02366 11 50323095 50323776 ECH