Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02346 atgaCGGttctttcttcttctctctgttcctcttcttcAATATCGTTTCCGTTGACATCTAATTGCTATGGCTTCACTTTCAGAACCCAAATCCAATCCTCAGCTTCCACCAACATTTTTACCCAAAAACTCATCGACACCAATCTCTTAACCATCGCCGAGTCCTTCTACGAGGATGAGCTTTGGGCCGCAGCCTCTCTCCGCGTTCGTTCCTTCCACCAATTCCGCCACGACACCTTCGGAGTGCAAGATCATACGAGGTACTTGGCTGAGCGCGAGTTCGAAGCACTTAAGGAGCGTGTTTCCGGGAAAAGATTGGGCTTCAGAAGAGTCTCTTGCATAAATGCTTCCCTTCCTTTGTCGCATATTGCCACTCTCTCCTATGATTTATGCTCTTCATGTAAGTTTTCTTCCAATGGAGAGGACAGGATCGTAGTTGGCACTCTTGATCTTAATCAGTGCTTGAGCCTTCCTGATGAAATCGCAGGGGTGAAGCCAGAGGTAATGGGAGCTGATATCACCAGGGCATACCTCAGTAATGTTTGTGTTGCTAGAGAGTTGCACAGAAATGGGTTGGCTTATGCACTTATTGAAAAGTCAAAGTTGGTTGCTTATGATTGGGGCATAACAGATTTGTACGTCCATGTTGCTGTTGACAATGAACCAGCTAAGAAATTGTATATAAAGAGTGGGTTTGTACATGAAAGTGATGAACCTGCGTGGCAGGCCAGGTTTCTAGATCGACCCCGAAGACTTCTCCTATGGTCGGGGCTCTCAAGGACCTAA 786 0.4453 MTVLSSSLCSSSSISFPLTSNCYGFTFRTQIQSSASTNIFTQKLIDTNLLTIAESFYEDELWAAASLRVRSFHQFRHDTFGVQDHTRYLAEREFEALKERVSGKRLGFRRVSCINASLPLSHIATLSYDLCSSCKFSSNGEDRIVVGTLDLNQCLSLPDEIAGVKPEVMGADITRAYLSNVCVARELHRNGLAYALIEKSKLVAYDWGITDLYVHVAVDNEPAKKLYIKSGFVHESDEPAWQARFLDRPRRLLLWSGLSRT 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02346 261 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 170 242 IPR016181 -
Cca11g02346 261 CDD NAT_SF 175 215 - -
Cca11g02346 261 PANTHER OS08G0260000 PROTEIN 11 260 - -
Cca11g02346 261 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 141 251 IPR000182 GO:0016407
Cca11g02346 261 Gene3D - 104 248 - -
Cca11g02346 261 Pfam Acetyltransferase (GNAT) family 169 232 IPR000182 GO:0016407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Cca11g02346 Acetyltransf_1 2.3e-06 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02346 - - gmx:100813722 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02346 11 49987164 49989061 Cca11g02346 11 49987164 49989061 ECH