Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02343 ATGAACCTGATGGAGAGAAAGAAAGCCATAAAGGCTTCAGCAGATTTAGCGATGGCTTCCACCAGAAACAAAACCACTCGCTGGAGCAGAGCCCTTATTGCGAATGCTTCCAGAGATGGTAACAGCAAGGTCCTCACGGAACACGTGTTAGGCTCATTATCGTCACCACAGAGGGTAAGGAAAAGCTTCACGAATAATTCTCACAGCATAAGGATCAGAAGCTGCAGAAACATGTTGAGAAGAAACCGAGGAGTCCACAGAACGAAGGATAGGGTGGTGGCGAGTTTCGTTGCGAAGAAGCTTGTCGAGAAGAGAACGCGAAGGCTCAAGAGTCTCGTACCAGGAGGAGAATCCATGGAAGATGTGTGTTTGGTTGAAGAAACCCTAGATTATATACAATCACTGCGAGCTCAAGTTGAAGTAATGAGATGTCTTGTCACTGCCTCAGAGCTCATGATCCTAAATCCATCAAAGGTTGGAGAAAAAGAGGCGCTCCCATATATACGTTAA 510 0.4608 MNLMERKKAIKASADLAMASTRNKTTRWSRALIANASRDGNSKVLTEHVLGSLSSPQRVRKSFTNNSHSIRIRSCRNMLRRNRGVHRTKDRVVASFVAKKLVEKRTRRLKSLVPGGESMEDVCLVEETLDYIQSLRAQVEVMRCLVTASELMILNPSKVGEKEALPYIR 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02343 169 CDD bHLH_AtIBH1_like 99 146 IPR044549 GO:0006355
Cca11g02343 169 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 1 148 - -
Cca11g02343 169 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 1 148 IPR044660 GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02343 5 150 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 43.624 2.22e-25 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02343 - - ccaj:109811886 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02343 11 49957988 49958636 Cca11g02343 11 49957988 49958636 ECH