Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02298 ATGGCTTTATGTTTAGCAAACAATGCATCTCCATTTTTGGTGATGCTAATCTCAATGTGGCTCTTAATATGCTGCTATGAAGCCAAAGAATATGTGGTTGGAGGCAGTGATAATTCCTGGAAGGTTCCTCTCTCATCCTCAGATTCACATTCACTCAATCACTGGGCCAACACTCACCAATTCAAAATCGGCGATACTCTCATTTTTAACTACGACGAGAGAACAGAATCAGTGCATGTAGTGAATAACACGGACTACGAAAGGTGCAACACGGTGGGGCAAGGACACGTGGTATTCAACGATGGCAGCACCAAGGTCGTACTTAACAAATCTGGATTCAAACACTTCATAAGTGGAAATAAAAGTCATTGCCAGATGGGGTTAAAGCTGGTTGTGCATATCGTGTCTAACAACAAAACCAAAAAGAAGTTTCAttctccatctccatcaccatcaccattaccacttttgctttccccatcaccgtcaccttcaccttcaccttcaccGCTTCCAAATAATCAAGGTGTTACTTGTAAATCAGGTGGTGGATTCATGGGAGTTATGATGTTGATGGGAGTGGTGGTATTAGTATCTTGA 600 0.3617 MALCLANNASPFLVMLISMWLLICCYEAKEYVVGGSDNSWKVPLSSSDSHSLNHWANTHQFKIGDTLIFNYDERTESVHVVNNTDYERCNTVGQGHVVFNDGSTKVVLNKSGFKHFISGNKSHCQMGLKLVVHIVSNNKTKKKFHSPSPSPSPLPLLLSPSPSPSPSPSPLPNNQGVTCKSGGGFMGVMMLMGVVVLVS 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02298 199 SUPERFAMILY Cupredoxins 28 135 IPR008972 -
Cca11g02298 199 MobiDBLite consensus disorder prediction 141 177 - -
Cca11g02298 199 Pfam Plastocyanin-like domain 40 127 IPR003245 GO:0009055
Cca11g02298 199 ProSiteProfiles Phytocyanin domain profile. 29 136 IPR003245 GO:0009055
Cca11g02298 199 Gene3D - 27 140 IPR008972 -
Cca11g02298 199 PANTHER BLUE COPPER PROTEIN 15 197 IPR039391 GO:0009055
Cca11g02298 199 MobiDBLite consensus disorder prediction 148 171 - -
Cca11g02298 199 PANTHER EARLY NODULIN-55-2 15 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02298 Cca-Chr11 49399825 49401389 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02298 27 171 Phytocyanin Superfamily AT5G57920 39.310 5.37e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02298 - - gmx:100784860 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02298 11 49399825 49401389 Cca11g02298 11 49399825 49401389 ECH