Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02284 ATGAGTGAGAAAGAGGGAGAAGCGACGTTGGTGCAGGTGCAGGGGAAGTACGAGCTGGGGCAAGGAACATTCGCCAAGGTGTATGACGCGCGGAATCTGAAAACGGGGCAGCACGTGGCCATGAAGGTGGTGGGGAAGGAGAAGGTGATGAAGGTGGGAATGATGGAGCAGATAAAAAGAGAGATAGCGGTGATGAAGATGGTGAAGCACCCCAACATAGTCTCGCTCCACGAGGTCTCCAAAGGCCGCCTCAAGGAGGACGCCGCCAGACGCTACTTCCACCAGCTCATATCCGCCGTCGACTTCTGCCACAGCCGCGGGGTCTTCCACCGCGACCTGAAGCCCGAGAATCTCCTCCTGGACGACAACGGAAACCTCAAAGTGTCGGACTTCGGACTGACCGCCTTCACGGAGCACCTGGGCCAGGACGGGCTGCTGCACACCACCTGCGGCACCCCCGCCTACGTGTCCCCCGAAGTCATAGCCAAGAAGGGCTACGACGGTGCAAAGGCTGATATATGGTCCTGCGGCGTCATCCTCTACGTCCTCCTCGCCGGCTTCTTACCCTTTCAGGACGATAATCTCGTCGCCATGTATAAGAAGATTTACAGAGGAGACTTCCGCTGTCCGCCCTGGTTTTCCCCCGAGGCTAGGAGGCTCGTCACCACCCTTTCCGAGGGCTTTAACTTGTCGCCCTTGTTTGAGGAGAGGAAGAGGGAGGAGATGAGGTTCGCCACGGCTTCAGGGGCAGGAGCGTGGCAGGAAGGGCAAGTTAACCATTGCTGCCGATATTTACGCCGTTACCCCGTCCTTTGTGGTGGTTCAGGTTAA 831 0.5788 MSEKEGEATLVQVQGKYELGQGTFAKVYDARNLKTGQHVAMKVVGKEKVMKVGMMEQIKREIAVMKMVKHPNIVSLHEVSKGRLKEDAARRYFHQLISAVDFCHSRGVFHRDLKPENLLLDDNGNLKVSDFGLTAFTEHLGQDGLLHTTCGTPAYVSPEVIAKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNLVAMYKKIYRGDFRCPPWFSPEARRLVTTLSEGFNLSPLFEERKREEMRFATASGAGAWQEGQVNHCCRYLRRYPVLCGGSG 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02284 276 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 6 79 224 - -
Cca11g02284 276 PANTHER - 79 224 - -
Cca11g02284 276 ProSitePatterns Serine/Threonine protein kinases active-site signature. 108 120 IPR008271 GO:0004672|GO:0006468
Cca11g02284 276 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 6 13 79 - -
Cca11g02284 276 Pfam Protein kinase domain 81 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g02284 276 Pfam Protein kinase domain 17 79 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g02284 276 Gene3D Phosphorylase Kinase; domain 1 10 83 - -
Cca11g02284 276 ProSitePatterns Protein kinases ATP-binding region signature. 19 46 IPR017441 GO:0005524
Cca11g02284 276 SUPERFAMILY Protein kinase-like (PK-like) 18 223 IPR011009 -
Cca11g02284 276 Gene3D Transferase(Phosphotransferase) domain 1 84 231 - -
Cca11g02284 276 SMART serkin_6 13 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g02284 276 ProSiteProfiles Protein kinase domain profile. 13 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g02284 276 PANTHER - 13 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02284 Cca-Chr11 49212180 49213010 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02284 5 224 CBL-interacting serine-threonine protein kinases AT4G30960 70.445 7.06e-115 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Cca11g02284 Pkinase 1.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02284 - K07198 var:108321114 368.622