Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02256 ATGGCGTATGATCAGAATTCCGTTCCCATGGATCTTCGTCCGCTGAACATGGCCGCCGCGGTGGCGGAGGAGCCCTTGATTTCTCCGGCCACCGTCACGCCGCCCACGCCCAATTCCGTCGGGGAGATTTTCTACACGCCCTCGGCCACCGCCGGCGCCGCCGCCACGTGGTGCGTCCGCCCCATTGCGCATCCCAACGTCAGCCCCGCCGCGTTCGGGTTTAACTACGGCGGTTCCGGTTACGGCAACCGCGTTGTGGCGGGGAATGCTTTGAATATGGGCAAGGTTTTGGGCTGTAATGGATTGGACAAGGCCTGCAATGATGTGAATGGTTTCGGTTATggtgttggcggtggcggtggcggtgttcggggcagcagagccgccggaagcggcggtgaacacggcggcgatgatggcggtagcgacgaatcagcatcggGGAGGAAGGTGAAGTTTCTGTGCAGTTTTGGTGGGAAGATTTTGCCTAGGCCTAGTGATGGAATGCTGAGATATGTTGGGGGGCAAACGAGGATCATTAGTGTTAGGAGAGATGTGAGTTTCAATGATTTGGTGCAGAAGATGGTTGACACTTATGGGCAGGCTTTGGTTATTAAGTACCAGCTCCCCGAGGAGGATCTTGATGCATTGGTGTCTGTGTCGTGTCCTGATGATGTGGAGAATATGATGGAGGAGTATGAGAAATTGGTTGAAAGATCTTCTGATGGTTCTGCTAAGTTGAGGGTTTTTCTGTTTTCTGCTTCGGATAGTGAATGTTCTAGTGGGGTGCAGTTTGGGGACTTGCAAGATACCGGGCAGAAATATTTTGATGCTGTGAATGGGATTGGTGTTACAGAGGGGGTTGGGGGTGGGATCAATAGGAAGGAGAGTGTTACAAGTGCTGCATCAACACAGAATTCTGATATGAGTGGAGGTGAGGCTCTTGACGGTTCAATTACAGGTCAAGGAGATGTGAGTGGGGTGTCCTTGTCATCATCTAAGGAGAATGTGTCAGCAGCTTCTTCAAACACAAGTTCAAATTTGGTGGTTTCAGAGGCCGGTGCATCGGTTTACTTGGGTAATTCCGCGGCTACGTTGGCTATGCCTGTTGCTAAGAATAGTCCTACTACCCACAATCCTTATTTCCAGAATGAGTTGGAAAAGTCGGTGCCTGTTACTTTGTCCCAGCAGCCATTTGGATTGCAGCAATCTGGAACAGAGATTCCGGTCACTTCACCTTATTTGCAGCCTTTTGTTGATCCGGGCCAGGAGGTTATGAACCATGCAGATTATGTCCAGCTGCCTTCCCAGATGGGGTTCACAAATACTCAGATTTTAGGAAAGACTGGGACTGTCTTCACCCCACAGCAGTTTCATGATAATACTCCTGGTTTAGCTTTCCATCCGGTCATCCCTGGGGTACAAATGACAATGACTCAACCATCTTCTCATGGAATAAGACCAAATGTTATTCAACAACCACAACCACAACCATTGGTGCAACCTCAGCAACATCTTTTGGATCAATACAATGATGAAAATACATCAGGAGTAAGGATTATCCAGGTTCCTGCTGAACGTAGCTACAACACATATCAGGTTCAAGCGAACCAAGTTCCTTCTGTCATAGTTGGTGGTAATTATGGCTGGGTTCAGGTTCCTCCACAAGAGCGTGTTGTTATTTCTGATGGATTGTTATCTCAACAACAGGTAATGATCCCTGAGAAAATCCGAAGAGCCGAGGACTGTACTATGTGTCAAAGAAAACTGCCTCATGCACATTCAGATCCAGTAGTTCCAGATCAGCATAATAATGGTGCATGTCCCAGTCCTGGTTCATCCCCAAGTCACCGTAGTTTCCCGATGGAGGACAACATAAAAGCTCAAGCAGCAAATAAGATTATGCCAATGAAGGAAGGCATTGCTGAACAAGGTGCTGGGACCAGACCCAGGGTTGTTGGAAAATTGGAACCTCTTGATGGAGTACATCATACTGAGACCACTGGGCTTTCTCATAATATTGAGCCACAGCCTGAAGGTGGGAGGATTTTTATGCAAAAGCCAGAAGAATTTGATCATTCCAGGAATTCATTTTTCCAGGAAAAGATTGGAAGGAGAGGTGAAAAGCAATCTCCAAATGATGAGCTCATGGGAAACGCACCACTGTCTTATCTACATGATGTTGCTGACCAGCACATGGTACCAGTTGAAAATTGGGTTAAACAGAATGTGCTTCTTAACAAACCTGTCAGTAATGATACACCTATAGTTGATGGAACATCTATACAAACTTCAGAGTGTATGGTTCAAGGATCTCAAAAAGAATATACTAATGAGCTTACTGGGGTTGGTTCTAAATCAGATGCCATAGATAATTGGATTAGACAAGACCATCTAAAAACTATTGATGGAAGGATGGACACCTTCAACATACGTAATTCTGAAGTTTATGTAAGTAATGATTACTCTTTTCTGCCGGTTGATAAATCCAGTGGGAATGATAAATTACATTACAACTCTCAGCAATCTGTAGAGGAAGAGGTGATTCTGGACAACAACTTTGGCAGGTCTAAATTGATAGTTGATGCGAATCAAAGTAAGATGACAGGTATGATGCCTTGTTCTATGGAAATTTCATACGGGCACAATTCCAGGTCAGGGGAATGCAATGAGGCTGCACAGCCCCCTGTTTGGGGCATTCCTGGGTCAAATTGTCCACCGAAGATTGGAAACCCCCACAGGGATGATTTAGTATCATCTTCATCCCCATCTGTCAGGTTTGGAGAGGTGCAGGATACTCCAAACTCACTTTTCAGCAATCAGGATCCCTGGAATATTCAGCATGGTACCTTCTTTCCACCTGCTGGACCTAACAAAGATGCATTGAAGAATCGTAATGATCACTTTGGTGAGAACTCAGGCAACTTTGGGGAACAAAGTTTAGAAGCACAGTTGGATGATACCCTCTACCAGTCATTCAAACAAAATTTAACTTTAGAACATGGTCGATATGCCAAAGCAGAAGACCAACAACTTCAAGCTGTTGCAGAAGATGTAGCAGCTTCTGTTCTGCACTCAAGAACTCCATCAAATTCTGACTTGCATTCCAGAGATGTTTCCTGTCAGGAAAACATTGAGGATGGAAGCGTTCAAAATAATCTAATAGATGTAACATGTGGACATAAAACTCAGGATGCCAAGAACAAGCAACCAGAAAAGGCAAATTTTGGCTTTCCTGCATCGGGTGTGGGAAAATTACAGGTTATAAAGAATTGTGATCTTGAAGAACTGACTGAACTGGGTTCTGGTACCTTTGGGACTGTATATCATGGAAAATGGAGGGGCACAGATGTTGCAATCAAGCGGATTACTGATAGATGTTTTGCTGGAAAGCCTTCAGAGCAAGAGCGCATGAGAAGTGACTTCTGGAATGAGGCAATCAAGCTGGCTGACTTGCACCATCCAAATGTGGTAGCTTTCTATGGTGTAGTGCTTGATGGCCCAGGAGGTTCTGTGGCAACAGTAACTGAGTATATGGTTAACGGTTCTTTAAGAAATTCCCTGCAAAAGAGTGAGAGGAATCTTGACAAGCGCAAGCGTCTTTTGATTGCAATGGACGTGGCATTTGGAATGGAGTACTTGCATGGAAGAAACATTGTACACTTTGACTTGAAAAGTGACAACTTGCTTGTGAATCTCCGAGATCCTCACCGCCCAATATGCAAGGTTGGCGACTTGGGTCTGTCCAAAGTAAAATGTCAGACACTGATCTCTGGTGGTGTGAGAGGAACTCTACCATGGATGGCTCCAGAACTGCTGAACGGAAGCAGTAGCCTTGTATCAGAGAAGGTTGATGTGTTTTCGTTTGGTATTGTGATGTGGGAACTCTATACTGGGGAGGAGCCATACGCTGACTTGCACTATGGTGCTATTATAGGTGGTATTGTGAGCAACACTTTGCGCCCTCCTGTTCCTGAATCTTGTGATCCAGAATGGAGATTGTTGATGGAGAGGTGCTGGTCATCAGAGCCATCTGAGAGACCTACCTTCACTGAGATTGCCAGTGAATTACGTTCTATAGCGTCCAAGATCTCTCCCAGAGGACAAAACTCTCCTAAGGGACAAAACCAACAGCTGCAACCCAATTCGCTACAGACTCAAGTCCACAAATGA 4173 0.4426 MAYDQNSVPMDLRPLNMAAAVAEEPLISPATVTPPTPNSVGEIFYTPSATAGAAATWCVRPIAHPNVSPAAFGFNYGGSGYGNRVVAGNALNMGKVLGCNGLDKACNDVNGFGYGVGGGGGGVRGSRAAGSGGEHGGDDGGSDESASGRKVKFLCSFGGKILPRPSDGMLRYVGGQTRIISVRRDVSFNDLVQKMVDTYGQALVIKYQLPEEDLDALVSVSCPDDVENMMEEYEKLVERSSDGSAKLRVFLFSASDSECSSGVQFGDLQDTGQKYFDAVNGIGVTEGVGGGINRKESVTSAASTQNSDMSGGEALDGSITGQGDVSGVSLSSSKENVSAASSNTSSNLVVSEAGASVYLGNSAATLAMPVAKNSPTTHNPYFQNELEKSVPVTLSQQPFGLQQSGTEIPVTSPYLQPFVDPGQEVMNHADYVQLPSQMGFTNTQILGKTGTVFTPQQFHDNTPGLAFHPVIPGVQMTMTQPSSHGIRPNVIQQPQPQPLVQPQQHLLDQYNDENTSGVRIIQVPAERSYNTYQVQANQVPSVIVGGNYGWVQVPPQERVVISDGLLSQQQVMIPEKIRRAEDCTMCQRKLPHAHSDPVVPDQHNNGACPSPGSSPSHRSFPMEDNIKAQAANKIMPMKEGIAEQGAGTRPRVVGKLEPLDGVHHTETTGLSHNIEPQPEGGRIFMQKPEEFDHSRNSFFQEKIGRRGEKQSPNDELMGNAPLSYLHDVADQHMVPVENWVKQNVLLNKPVSNDTPIVDGTSIQTSECMVQGSQKEYTNELTGVGSKSDAIDNWIRQDHLKTIDGRMDTFNIRNSEVYVSNDYSFLPVDKSSGNDKLHYNSQQSVEEEVILDNNFGRSKLIVDANQSKMTGMMPCSMEISYGHNSRSGECNEAAQPPVWGIPGSNCPPKIGNPHRDDLVSSSSPSVRFGEVQDTPNSLFSNQDPWNIQHGTFFPPAGPNKDALKNRNDHFGENSGNFGEQSLEAQLDDTLYQSFKQNLTLEHGRYAKAEDQQLQAVAEDVAASVLHSRTPSNSDLHSRDVSCQENIEDGSVQNNLIDVTCGHKTQDAKNKQPEKANFGFPASGVGKLQVIKNCDLEELTELGSGTFGTVYHGKWRGTDVAIKRITDRCFAGKPSEQERMRSDFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNSLQKSERNLDKRKRLLIAMDVAFGMEYLHGRNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELYTGEEPYADLHYGAIIGGIVSNTLRPPVPESCDPEWRLLMERCWSSEPSERPTFTEIASELRSIASKISPRGQNSPKGQNQQLQPNSLQTQVHK 1390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02256 1390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1219 1231 IPR008271 GO:0004672|GO:0006468
Cca11g02256 1390 MobiDBLite consensus disorder prediction 606 620 - -
Cca11g02256 1390 MobiDBLite consensus disorder prediction 594 620 - -
Cca11g02256 1390 Gene3D Transferase(Phosphotransferase) domain 1 1182 1390 - -
Cca11g02256 1390 ProSitePatterns Protein kinases ATP-binding region signature. 1100 1131 IPR017441 GO:0005524
Cca11g02256 1390 Gene3D Phosphorylase Kinase; domain 1 1087 1181 - -
Cca11g02256 1390 Gene3D - 171 254 - -
Cca11g02256 1390 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 114 906 - -
Cca11g02256 1390 SUPERFAMILY CAD & PB1 domains 166 260 - -
Cca11g02256 1390 ProSiteProfiles Protein kinase domain profile. 1094 1360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g02256 1390 Pfam Protein tyrosine and serine/threonine kinase 1097 1357 IPR001245 GO:0004672|GO:0006468
Cca11g02256 1390 MobiDBLite consensus disorder prediction 296 313 - -
Cca11g02256 1390 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 922 1364 - -
Cca11g02256 1390 PRINTS Tyrosine kinase catalytic domain signature 1213 1231 IPR001245 GO:0004672|GO:0006468
Cca11g02256 1390 PRINTS Tyrosine kinase catalytic domain signature 1328 1350 IPR001245 GO:0004672|GO:0006468
Cca11g02256 1390 PRINTS Tyrosine kinase catalytic domain signature 1176 1189 IPR001245 GO:0004672|GO:0006468
Cca11g02256 1390 PRINTS Tyrosine kinase catalytic domain signature 1284 1306 IPR001245 GO:0004672|GO:0006468
Cca11g02256 1390 SMART PB1_new 165 254 IPR000270 GO:0005515
Cca11g02256 1390 CDD STKc_MAP3K-like 1100 1357 - -
Cca11g02256 1390 SUPERFAMILY Protein kinase-like (PK-like) 1088 1355 IPR011009 -
Cca11g02256 1390 PANTHER SERINE-THREONINE PROTEIN KINASE 922 1364 - -
Cca11g02256 1390 PANTHER SERINE-THREONINE PROTEIN KINASE 114 906 - -
Cca11g02256 1390 Pfam PB1 domain 170 253 IPR000270 GO:0005515
Cca11g02256 1390 MobiDBLite consensus disorder prediction 1361 1390 - -
Cca11g02256 1390 SMART serkin_6 1094 1365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g02256 1390 MobiDBLite consensus disorder prediction 124 146 - -
Cca11g02256 1390 MobiDBLite consensus disorder prediction 293 330 - -
Cca11g02256 1390 CDD PB1_UP2 154 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02256 Cca-Chr11 48843393 48851865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02256 150 634 MAP Kinase Kinase Kinase AT3G46920 38.650 3.99e-81 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Cca11g02256 PK_Tyr_Ser-Thr 1.4e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02256 - - gmx:100819234 2002.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02256 11 48843393 48851865 Cca11g02256 11 48843393 48851865 ECH