Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02244 ATGATCATGGGATACCAAAAGCCTGCATGGTTGGAAGCTCTTTACACACAAAAGTTCTTCGTGGGGTGCTCTTACCATGAGAACGCCAAAAAGAATGAGAAGAATGTTTGCTGCTTAGATTGTTGCACCAGTATTTGCCCTCACTGCTTGCCATCTCATCGCTTCCACAGGCTTCTTCAGGTTCGCCGTTACGTTTATCATGATGTTGTAAGGTTGGAAGATCTTCAGAAACTCATAGACTGCTCCAACGTTCAGGCCTATACTATCAATAGTGCCAAAGTGGTGTTCATCAAGAAGAGACCTCAGAACCGGCAATTCAAAGGGTCGGGAAATTACTGCACTTCCTGTGATAGAAGTCTCCAAGAGCCTTTTATCCATTGCTCCCTTGGATGCAAGGTGGATTTTGTGCTGAAACACTATAAGGACCTCTCCCCTTACTTAAGGACATGCAACTCCCTACAGCTAAGTCCTGATTTTCTGATCCCACAAGAAATGGGGGATGAGGAGATGACTCGTTCAACGGTGGTGGATTATGATGAACCAATGAGCTCAAGTTCGGGATCATCAGGGTCAGAGAATAACATGAGCATGGCTTGCACAGAGATTGTTAGGAAGAGGAGGAGTGGATGGAGCACTGTGTGTGCAAAGTTTATGGCCAATAGCAATAAGGTTTCGGATGAAGACATGGCGACTAGCATGAGTAGAAGAAAAGGAATTCCTCATAGATCCCCTCTGTGTTAG 741 0.4521 MIMGYQKPAWLEALYTQKFFVGCSYHENAKKNEKNVCCLDCCTSICPHCLPSHRFHRLLQVRRYVYHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPFIHCSLGCKVDFVLKHYKDLSPYLRTCNSLQLSPDFLIPQEMGDEEMTRSTVVDYDEPMSSSSGSSGSENNMSMACTEIVRKRRSGWSTVCAKFMANSNKVSDEDMATSMSRRKGIPHRSPLC 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02244 246 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 246 - -
Cca11g02244 246 Pfam PLATZ transcription factor 62 133 IPR006734 -
Cca11g02244 246 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 246 - -
Cca11g02244 246 MobiDBLite consensus disorder prediction 227 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02244 Cca-Chr11 48702868 48704634 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Cca11g02244 PLATZ 4e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02244 - - gmx:100785737 501.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02244 11 48702868 48704634 Cca11g02244 11 48702868 48704634 ECH